RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 FAM90A9PA6NNJ1 464 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 VGLL3A8MV65 326 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 CCSO14618 274 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 HRASP01112 189 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 AKR1C2P52895 323 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 ERVK-16P61578 105 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 IZUMO4Q1ZYL8 232 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 C2orf68Q2NKX9 166 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 TMEM219Q86XT9 240 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 OSR1Q8TAX0 266 aaPredicted RBP15.26■□□□□ 0.03
SMPD1-205ENST00000531303 PIFOQ8TCI5 191 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 MED28Q9H204 178 aa15.26■□□□□ 0.03
SMPD1-205ENST00000531303 MXRA5Q9NR99 2828 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 A0A0B4J2A0 478 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 FAM25EA8MYX2 175 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 IGKV1-5P01602 117 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 IGHV4-59P01825 116 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 NQO2P16083 231 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 F2RL1P55085 397 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 COMMD9Q9P000 198 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 SHPKQ9UHJ6 478 aa15.25■□□□□ 0.03
SMPD1-205ENST00000531303 MARCH11A6NNE9 402 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 GOSR2O14653 212 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 SLC25A17O43808 307 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 DYNLT3P51808 116 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 MMDQ15546 238 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 GGNBP1Q5YKI7 109 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 Q6YL49 198 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 THNSL2Q86YJ6 484 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 LRTM2Q8N967 370 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 IL22RA2Q969J5 263 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 RRNAD1Q96FB5 475 aaKnown RBP15.24■□□□□ 0.03
SMPD1-205ENST00000531303 SEC22AQ96IW7 307 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 RHOVQ96L33 236 aa15.24■□□□□ 0.03
SMPD1-205ENST00000531303 A0A0G2JRQ6 117 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 C13orf42A0A1B0GVH6 325 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 NCBP2LA6PVI3 153 aaKnown RBP15.23■□□□□ 0.03
SMPD1-205ENST00000531303 ATG12O94817 140 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 SIX6O95475 246 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 SAA1P0DJI8 122 aaPredicted RBP15.23■□□□□ 0.03
SMPD1-205ENST00000531303 IER3P46695 156 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 EBI3Q14213 229 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 FCN2Q15485 313 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 H2BFWTQ7Z2G1 175 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 TSNAXQ99598 290 aaKnown RBP15.23■□□□□ 0.03
SMPD1-205ENST00000531303 MGAT4CQ9UBM8 478 aa15.23■□□□□ 0.03
SMPD1-205ENST00000531303 PLXNB1O43157 2135 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 HOXA3O43365 443 aaPredicted RBP15.22■□□□□ 0.03
SMPD1-205ENST00000531303 IFNA21P01568 189 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 IGLV2-23P01705 113 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 LGALS7P47929 136 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 PSG5Q15238 335 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 VMA21Q3ZAQ7 101 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 RBMS3Q6XE24 437 aaKnown RBP15.22■□□□□ 0.03
SMPD1-205ENST00000531303 CADM3Q8N126 398 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 GPR146Q96CH1 333 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 DUX5Q96PT3 197 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 TMEM140Q9NV12 185 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 NSG2Q9Y328 171 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 TNCP24821 2201 aa15.22■□□□□ 0.03
SMPD1-205ENST00000531303 TRAV3A0A0B4J244 114 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 C5orf51A6NDU8 294 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 BTBD17A6NE02 478 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 DBX1A6NMT0 343 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 MPTX1A8MV57 137 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 NBR2O15453 112 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 RRAS2P62070 204 aaPredicted RBP15.21■□□□□ 0.03
SMPD1-205ENST00000531303 PLGLAQ15195 96 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 AANATQ16613 207 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 OR4A47Q6IF82 309 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 Q8N6K4 173 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 CLCC1Q96S66 551 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 RNF5Q99942 180 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 AIFM2Q9BRQ8 373 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 FBXL15Q9H469 300 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 TPSG1Q9NRR2 321 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 METTL1Q9UBP6 276 aaKnown RBP15.21■□□□□ 0.03
SMPD1-205ENST00000531303 TCF19Q9Y242 345 aa15.21■□□□□ 0.03
SMPD1-205ENST00000531303 FN1P02751 2386 aaKnown RBP15.21■□□□□ 0.03
SMPD1-205ENST00000531303 NSD1Q96L73 2696 aaPredicted RBP15.21■□□□□ 0.02
SMPD1-205ENST00000531303 A6NDX4 124 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 VDAC1P21796 283 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 UBE2KP61086 200 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 SCGB2A2Q13296 93 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 SSMEM1Q8WWF3 244 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 SLC25A33Q9BSK2 321 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 PRDM13Q9H4Q3 707 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 RAB18Q9NP72 206 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 KIAA1456Q9P272 454 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 TMED3Q9Y3Q3 217 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 MMP24Q9Y5R2 645 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 PIGBOS1A0A0B4J2F0 54 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 DUXBA0A1W2PPF3 345 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 OR2A4O95047 310 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 OR9G9P0C7N8 305 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 CXCL3P19876 107 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 NMSQ5H8A3 153 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 Q6ZRM9 215 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 OR11H7Q8NGC8 314 aa15.2■□□□□ 0.02
SMPD1-205ENST00000531303 LSM10Q969L4 123 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms