RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 SMIM23A6NLE4 172 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 SULT1B1O43704 296 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 PSIP1O75475 530 aaKnown RBP1.47□□□□□ -2.17
CD44-233ENST00000531141 APODP05090 189 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 GTF2F2P13984 249 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 PRTN3P24158 256 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 CRABP2P29373 138 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 ZNF83P51522 516 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 ATP5J2P56134 94 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 DSTNP60981 165 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 TSPAN5P62079 268 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 BNIP2Q12982 314 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 MED21Q13503 144 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 DEFB109BQ30KR1 87 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 FAM151BQ6UXP7 276 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 SSX7Q7RTT5 188 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 DCXRQ7Z4W1 244 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 CRLF3Q8IUI8 442 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 SELENOHQ8IZQ5 122 aaKnown RBP1.47□□□□□ -2.17
CD44-233ENST00000531141 OR6K3Q8NGY3 331 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 CCL17Q92583 94 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 CHMP6Q96FZ7 201 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 CPB2Q96IY4 423 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 ADTRPQ96IZ2 230 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 SERPINB11Q96P15 392 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 CIB1Q99828 191 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 ANAPC13Q9BS18 74 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 DRC3Q9H069 523 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 ACOT13Q9NPJ3 140 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 USE1Q9NZ43 259 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 EMC3Q9P0I2 261 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 RBM12B-AS1Q9P1G2 102 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 MRM2Q9UI43 246 aaKnown RBP1.47□□□□□ -2.17
CD44-233ENST00000531141 POFUT2Q9Y2G5 429 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 URGCP-MRPS24S4R325 110 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 ANK2Q01484 3957 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 DOCK5Q9H7D0 1870 aa1.47□□□□□ -2.17
CD44-233ENST00000531141 VWFP04275 2813 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 TVP23AA6NH52 213 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 TMEM210A6NLX4 147 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 PLPP3O14495 311 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 FFAR1O14842 300 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 LIN7AO14910 233 aaPredicted RBP1.46□□□□□ -2.18
CD44-233ENST00000531141 COCHO43405 550 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 TRAPPC3O43617 180 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 NDUFS6O75380 124 aaKnown RBP1.46□□□□□ -2.18
CD44-233ENST00000531141 SOD3P08294 240 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 CNTFRP26992 372 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 KDELR2P33947 212 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 MAGEA2P43356 314 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 OR2B6P58173 313 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 UBE2G2P60604 165 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 MYL6P60660 151 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 FADDQ13158 208 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 EIF3IQ13347 325 aaKnown RBP1.46□□□□□ -2.18
CD44-233ENST00000531141 ZBTB6Q15916 424 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 UAP1Q16222 522 aaPredicted RBP1.46□□□□□ -2.18
CD44-233ENST00000531141 TNXAQ16473 311 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 SAPCD1Q5SSQ6 148 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 RESP18Q5W5W9 173 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 GLYATQ6IB77 296 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 FAHD1Q6P587 224 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 LRRC6Q86X45 466 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 SLC25A45Q8N413 288 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 OR2M3Q8NG83 312 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 OR2Y1Q8NGV0 311 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 OR5AK3PQ8NH89 298 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 TWIST2Q8WVJ9 160 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 ANKRD7Q92527 254 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 RORBQ92753 470 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 OR8B2Q96RD0 313 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 C7orf50Q9BRJ6 194 aaKnown RBP1.46□□□□□ -2.18
CD44-233ENST00000531141 WDR54Q9H977 334 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 RMND1Q9NWS8 449 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 MAT2BQ9NZL9 334 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 CLEC2DQ9UHP7 191 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 C14orf166Q9Y224 244 aaKnown RBP1.46□□□□□ -2.18
CD44-233ENST00000531141 CCL26Q9Y258 94 aa1.46□□□□□ -2.18
CD44-233ENST00000531141 ZNF638Q14966 1978 aaKnown RBP1.46□□□□□ -2.18
CD44-233ENST00000531141 KIAA1549LQ6ZVL6 1849 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 HERC2O95714 4834 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 MDC1Q14676 2089 aaKnown RBP1.45□□□□□ -2.18
CD44-233ENST00000531141 MYOFQ9NZM1 2061 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 RBFOX3A6NFN3 312 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 GOLGA6L10A6NI86 522 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 G3V3Q6 166 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 GOLGA6L19H0YKK7 550 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 TOX3O15405 576 aaPredicted RBP1.45□□□□□ -2.18
CD44-233ENST00000531141 SC5DO75845 299 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 PDYNP01213 254 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 CD8AP01732 235 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 OPN1SWP03999 348 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 SERPINA6P08185 405 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 OCM2P0CE71 109 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 SLC35E2BP0CK96 405 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 CGB3P0DN86 165 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 CGB7P0DN87 165 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 UGT2B10P36537 528 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 RANBP1P43487 201 aa1.45□□□□□ -2.18
CD44-233ENST00000531141 TTPAP49638 278 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms