RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 UCP1P25874 307 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 LPAR6P43657 344 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 RIPPLY3P57055 190 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 UBE2MP61081 183 aaKnown RBP13.45□□□□□ -0.26
SF3B2-211ENST00000531041 BLCAPP62952 87 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 SUPT4H1P63272 117 aaKnown RBP13.45□□□□□ -0.26
SF3B2-211ENST00000531041 RELBQ01201 579 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 POU2AF1Q16633 256 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 SLC25A42Q86VD7 318 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 DUSP18Q8NEJ0 188 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 RHOVQ96L33 236 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 RASL11BQ9BPW5 248 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 PRSS22Q9GZN4 317 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 C20orf85Q9H1P6 137 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 METTL1Q9UBP6 276 aaKnown RBP13.45□□□□□ -0.26
SF3B2-211ENST00000531041 FLVCR2Q9UPI3 526 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 ARPC1BO15143 372 aaKnown RBP13.44□□□□□ -0.26
SF3B2-211ENST00000531041 SERPINE2P07093 398 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 CRYGBP07316 175 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 OR5AC1P0C628 307 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 NQO2P16083 231 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 UBE2KP61086 200 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 DCTN2Q13561 401 aaKnown RBP13.44□□□□□ -0.26
SF3B2-211ENST00000531041 SP6Q3SY56 376 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 VMA21Q3ZAQ7 101 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 NRARPQ7Z6K4 114 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 TEX45Q8NA69 505 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 ENKURQ8TC29 256 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 GLYATL2Q8WU03 294 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 TMEM222Q9H0R3 208 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 FBXL15Q9H469 300 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 SIGLEC9Q9Y336 463 aa13.44□□□□□ -0.26
SF3B2-211ENST00000531041 TET2Q6N021 2002 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-211ENST00000531041 NDUFA7O95182 113 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 SAA1P0DJI8 122 aaPredicted RBP13.43□□□□□ -0.26
SF3B2-211ENST00000531041 HKR1P10072 659 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 PLGLAQ15195 96 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 LIN54Q6MZP7 749 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 Q6ZSV7 163 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 PPP1R27Q86WC6 154 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 CADM3Q8N126 398 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 Q8N2B8 174 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 VSTM2AQ8TAG5 236 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 R3HDM4Q96D70 268 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 ALX4Q9H161 411 aaPredicted RBP13.43□□□□□ -0.26
SF3B2-211ENST00000531041 ZNF702PQ9H963 129 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 NUDT15Q9NV35 164 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 NUBP2Q9Y5Y2 271 aa13.43□□□□□ -0.26
SF3B2-211ENST00000531041 ATRQ13535 2644 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 CDS2O95674 445 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 IGKV1-39P01597 117 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 HLA-DRB1P01911 266 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 IGKV1D-39P04432 117 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 KRTAP24-1Q3LI83 254 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 Q6ZS46 218 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 VKORC1L1Q8N0U8 176 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 PUSL1Q8N0Z8 303 aaKnown RBP13.42□□□□□ -0.26
SF3B2-211ENST00000531041 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-211ENST00000531041 C16orf95Q9H693 158 aa13.42□□□□□ -0.26
SF3B2-211ENST00000531041 TRAV6A0A075B6T7 132 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 MARCH11A6NNE9 402 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 OR2A4O95047 310 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 KRASP01116 189 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 IGHG2P01859 326 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 ANXA3P12429 323 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 ANXA7P20073 488 aaKnown RBP13.41□□□□□ -0.26
SF3B2-211ENST00000531041 MECP2P51608 486 aaKnown RBP13.41□□□□□ -0.26
SF3B2-211ENST00000531041 ERVK-16P61578 105 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 PPP1R1AQ13522 171 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 TMEM187Q14656 261 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 DMBX1Q8NFW5 382 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 OR4F5Q8NH21 305 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 TAF15Q92804 592 aaKnown RBP eCLIP13.41□□□□□ -0.26
SF3B2-211ENST00000531041 SEC22AQ96IW7 307 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 OR2A7Q96R45 310 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 TPSG1Q9NRR2 321 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 BET1LQ9NYM9 111 aa13.41□□□□□ -0.26
SF3B2-211ENST00000531041 SH2D7A6NKC9 451 aaPredicted RBP13.4□□□□□ -0.26
SF3B2-211ENST00000531041 FCN1O00602 326 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 KBTBD11O94819 623 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 IL6RP08887 468 aaPredicted RBP13.4□□□□□ -0.26
SF3B2-211ENST00000531041 H2AFB2P0C5Z0 115 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 OR4E1P0C645 316 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 VAMP1P23763 118 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 G6PCP35575 357 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 RAG2P55895 527 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 MRGPRG-AS1Q2M3A8 158 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 TRIM16LQ309B1 348 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 OR4A47Q6IF82 309 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 SSX9Q7RTT3 188 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 TMEM56Q96MV1 263 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 TMEM56-RWDD3S4R434 201 aa13.4□□□□□ -0.26
SF3B2-211ENST00000531041 CREBL2O60519 120 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-211ENST00000531041 ATG12O94817 140 aa13.39□□□□□ -0.27
SF3B2-211ENST00000531041 SFT2D2O95562 160 aa13.39□□□□□ -0.27
SF3B2-211ENST00000531041 PTTG1O95997 202 aa13.39□□□□□ -0.27
SF3B2-211ENST00000531041 SRPXP78539 464 aa13.39□□□□□ -0.27
SF3B2-211ENST00000531041 C9orf152Q5JTZ5 239 aa13.39□□□□□ -0.27
SF3B2-211ENST00000531041 PLET1Q6UQ28 207 aa13.39□□□□□ -0.27
SF3B2-211ENST00000531041 ZNF562Q6V9R5 426 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms