RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 CENPOQ9BU64 300 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 V9GY05 133 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 TMEM272A0A1B0GTI8 110 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 PPP5D1E7EU14 171 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 CREBL2O60519 120 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-219ENST00000530495 GGCTO75223 188 aaKnown RBP11.21□□□□□ -0.61
CAPN1-219ENST00000530495 EDN2P20800 178 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 CBLN1P23435 193 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 PSMD7P51665 324 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
CAPN1-219ENST00000530495 OGFRL1Q5TC84 451 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-219ENST00000530495 SLC25A42Q86VD7 318 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 GPHB5Q86YW7 130 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 MMD2Q8IY49 270 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 H1FOOQ8IZA3 346 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-219ENST00000530495 WDR89Q96FK6 387 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-219ENST00000530495 GINS4Q9BRT9 223 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 SCN3BQ9NY72 215 aa11.21□□□□□ -0.61
CAPN1-219ENST00000530495 ERICH4A6NGS2 130 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 EBAG9O00559 213 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 MFNGO00587 321 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 OR2J3O76001 311 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 OR2C1O95371 312 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 HLA-AP01891 365 aaKnown RBP11.2□□□□□ -0.62
CAPN1-219ENST00000530495 SAA1P0DJI8 122 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-219ENST00000530495 GNB3P16520 340 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 PSMA1P25786 263 aaKnown RBP11.2□□□□□ -0.62
CAPN1-219ENST00000530495 CALRP27797 417 aaKnown RBP11.2□□□□□ -0.62
CAPN1-219ENST00000530495 Q6ZS49 121 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 OR10R2Q8NGX6 335 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 MAFIPQ8WZ33 124 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 ZNF257Q9Y2Q1 563 aa11.2□□□□□ -0.62
CAPN1-219ENST00000530495 RAB27BO00194 218 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 CASQ2O14958 399 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-219ENST00000530495 HSMCR30P0CW71 290 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 GADD45AP24522 165 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 FABP5Q01469 135 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 RCN1Q15293 331 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 C10orf55Q5SWW7 151 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 HES5Q5TA89 166 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 SLC16A13Q7RTY0 426 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 LINC00476Q8WZB0 136 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 OVOL2Q9BRP0 275 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 DCUN1D5Q9BTE7 237 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 FBXL7Q9UJT9 491 aa11.19□□□□□ -0.62
CAPN1-219ENST00000530495 HMX3A6NHT5 357 aa11.18□□□□□ -0.62
CAPN1-219ENST00000530495 NPIPB5A8MRT5 1133 aa11.18□□□□□ -0.62
CAPN1-219ENST00000530495 TEX22C9J3V5 150 aa11.18□□□□□ -0.62
CAPN1-219ENST00000530495 FCGR3BO75015 233 aa11.18□□□□□ -0.62
CAPN1-219ENST00000530495 HIST1H1DP16402 221 aaKnown RBP11.18□□□□□ -0.62
CAPN1-219ENST00000530495 ZNF57Q68EA5 555 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-219ENST00000530495 TMEM61Q8N0U2 210 aa11.18□□□□□ -0.62
CAPN1-219ENST00000530495 OR51E2Q9H255 320 aa11.18□□□□□ -0.62
CAPN1-219ENST00000530495 DUSP21Q9H596 190 aa11.18□□□□□ -0.62
CAPN1-219ENST00000530495 ACOT13Q9NPJ3 140 aa11.18□□□□□ -0.62
CAPN1-219ENST00000530495 A0A075B6Q4 140 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 IGKV1D-8A0A087WSZ0 117 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 RAB6AP20340 208 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 TALDO1P37837 337 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 MLLT11Q13015 90 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-219ENST00000530495 KLK9Q2XQG4 91 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 FAM106AQ4KMX7 169 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 ZNF645Q8N7E2 425 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 GGTLC1Q9BX51 225 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 SLC2A9Q9NRM0 540 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 MLXQ9UH92 298 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 KLK9Q9UKQ9 250 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 PRELID3BQ9Y3B1 194 aa11.17□□□□□ -0.62
CAPN1-219ENST00000530495 LOC102724200A0A096LPH7 203 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-219ENST00000530495 TMEM213A2RRL7 107 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 A8MWP6 167 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 E7EUB6 86 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 NDUFB8O95169 186 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 IGLV2-14P01704 120 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 HLA-DQB1P01920 261 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 CRYGCP07315 174 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 IL6RP08887 468 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-219ENST00000530495 ZNF735P0CB33 412 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 MAS1LP35410 378 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 ARL3P36405 182 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 MAP2K4P45985 399 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 RPL30P62888 115 aaKnown RBP11.16□□□□□ -0.62
CAPN1-219ENST00000530495 ARFRP1Q13795 201 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 SSX1Q16384 188 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 ANKRD55Q3KP44 614 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 CLEC19AQ6UXS0 136 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 VKORC1L1Q8N0U8 176 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 OR52B4Q8NGK2 314 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 FANCD2OSQ96PS1 177 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 OR2A7Q96R45 310 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 MRPS7Q9Y2R9 242 aaKnown RBP11.16□□□□□ -0.62
CAPN1-219ENST00000530495 TPRKBQ9Y3C4 175 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 OR2W1Q9Y3N9 320 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 SELENOKQ9Y6D0 94 aa11.16□□□□□ -0.62
CAPN1-219ENST00000530495 TRAV1-2A0A0B4J238 106 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 A0A1B0GW64 132 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms