RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 LGI3Q8N145 548 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 DMBX1Q8NFW5 382 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 FLYWCH2Q96CP2 140 aaKnown RBP8.54□□□□□ -1.04
SOX6-213ENST00000530378 DUX5Q96PT3 197 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 TPSG1Q9NRR2 321 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 MGAT4CQ9UBM8 478 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 C13orf42A0A1B0GVH6 325 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 MARCH11A6NNE9 402 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
SOX6-213ENST00000530378 SNRPGP15A8MWD9 76 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 CDS2O95674 445 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 IGHV4-59P01825 116 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 TMEM11P17152 192 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 CXCL3P19876 107 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 OR2B8PP59922 312 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 GGNBP1Q5YKI7 109 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 SIGLECL1Q8N7X8 197 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 RBPMSQ93062 196 aaKnown RBP8.54□□□□□ -1.04
SOX6-213ENST00000530378 WDR89Q96FK6 387 aaPredicted RBP8.54□□□□□ -1.04
SOX6-213ENST00000530378 EAF1Q96JC9 268 aaPredicted RBP8.54□□□□□ -1.04
SOX6-213ENST00000530378 CHIAQ9BZP6 476 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 NSG2Q9Y328 171 aa8.54□□□□□ -1.04
SOX6-213ENST00000530378 TRAV3A0A0B4J244 114 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 SH2D7A6NKC9 451 aaPredicted RBP8.53□□□□□ -1.04
SOX6-213ENST00000530378 OOSP1A8MZH6 123 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 SLC25A17O43808 307 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 HPRT1P00492 218 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 SAA1P0DJI8 122 aaPredicted RBP8.53□□□□□ -1.04
SOX6-213ENST00000530378 BRS3P32247 399 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 ARHGDIBP52566 201 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 F2RL1P55085 397 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 RRAS2P62070 204 aaPredicted RBP8.53□□□□□ -1.04
SOX6-213ENST00000530378 MMDQ15546 238 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 LRRC75BQ2VPJ9 315 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 OR11H7Q8NGC8 314 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 SEC22AQ96IW7 307 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 TMEM56Q96MV1 263 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 CLCC1Q96S66 551 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 TMEM140Q9NV12 185 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 TMEM56-RWDD3S4R434 201 aa8.53□□□□□ -1.04
SOX6-213ENST00000530378 C5orf51A6NDU8 294 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 NCBP2LA6PVI3 153 aaKnown RBP8.52□□□□□ -1.04
SOX6-213ENST00000530378 RBFOX2O43251 390 aaKnown RBP eCLIP8.52□□□□□ -1.04
SOX6-213ENST00000530378 MOSP00540 346 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 MYOD1P15172 320 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 CD1BP29016 333 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 MC5RP33032 325 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 ERVK-16P61578 105 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 SRPXP78539 464 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 HABP2Q14520 560 aaPredicted RBP8.52□□□□□ -1.04
SOX6-213ENST00000530378 TMEM177Q53S58 311 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 OR4A47Q6IF82 309 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 OR4C13Q8NGP0 309 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 CD300LFQ8TDQ1 290 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 OR10C1Q96KK4 312 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 RHOVQ96L33 236 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 FBXL15Q9H469 300 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 PLEKHA2Q9HB19 425 aa8.52□□□□□ -1.04
SOX6-213ENST00000530378 NIPBLQ6KC79 2804 aaeCLIP8.52□□□□□ -1.05
SOX6-213ENST00000530378 DBX1A6NMT0 343 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 HOXA3O43365 443 aaPredicted RBP8.52□□□□□ -1.05
SOX6-213ENST00000530378 RBMXL2O75526 392 aaKnown RBP8.52□□□□□ -1.05
SOX6-213ENST00000530378 IGLV2-23P01705 113 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 OR9G9P0C7N8 305 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 RRASP10301 218 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 FOSL1P15407 271 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 NQO2P16083 231 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 SRD5A1P18405 259 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 BCAP31P51572 246 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 CD83Q01151 205 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 PLGLAQ15195 96 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 SPINK9Q5DT21 86 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 DHRS7BQ6IAN0 325 aaPredicted RBP8.52□□□□□ -1.05
SOX6-213ENST00000530378 H2BFWTQ7Z2G1 175 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 OR2T10Q8NGZ9 312 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 PIFOQ8TCI5 191 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 GPR146Q96CH1 333 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 RRNAD1Q96FB5 475 aaKnown RBP8.52□□□□□ -1.05
SOX6-213ENST00000530378 COMMD9Q9P000 198 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 GSKIPQ9P0R6 139 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 METTL1Q9UBP6 276 aaKnown RBP8.52□□□□□ -1.05
SOX6-213ENST00000530378 CACNG5Q9UF02 275 aa8.52□□□□□ -1.05
SOX6-213ENST00000530378 A0A0B4J2A0 478 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 B3GALNT1O75752 331 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 SCGB1D2O95969 90 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 HRASP01112 189 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 OPN1MWP04001 364 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 FAM106CPP0CH98 169 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 OPN1MW2P0DN77 364 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 OPN1MW3P0DN78 364 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 H2BFSP57053 126 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 GNB1P62873 340 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 CD300CQ08708 224 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 PJVKQ0ZLH3 352 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 PSG5Q15238 335 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 Q6ZRM9 215 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 C9orf139Q6ZV77 190 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 TCTEX1D1Q8N7M0 179 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 OR5M8Q8NGP6 311 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 OSR1Q8TAX0 266 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms