RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 GINS3Q9BRX5 216 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 RNF7Q9UBF6 113 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 WNK1Q9H4A3 2382 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 CTXND1A0A1B0GTU2 59 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 GRIFINA4D1Z8 144 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 OTX1P32242 354 aaPredicted RBP10.42□□□□□ -0.74
SCN3B-206ENST00000530277 IER3P46695 156 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 UCP3P55916 312 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 UBE2L3P68036 154 aaKnown RBP10.42□□□□□ -0.74
SCN3B-206ENST00000530277 FXYD3Q14802 87 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 TNXAQ16473 311 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 C18orf12Q96KH6 178 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 LPAR2Q9HBW0 351 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 SEMA5BQ9P283 1151 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 CARHSP1Q9Y2V2 147 aaKnown RBP10.42□□□□□ -0.74
SCN3B-206ENST00000530277 PXMP4Q9Y6I8 212 aa10.42□□□□□ -0.74
SCN3B-206ENST00000530277 NCBP2LA6PVI3 153 aaKnown RBP10.41□□□□□ -0.74
SCN3B-206ENST00000530277 TRGC1P0CF51 173 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 CD59P13987 128 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 SRD5A3Q9H8P0 318 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 NUP210Q8TEM1 1887 aaPredicted RBP10.41□□□□□ -0.74
SCN3B-206ENST00000530277 DBX2Q6ZNG2 339 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 Q6ZT83 130 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 EIF4E3Q8N5X7 224 aaKnown RBP10.41□□□□□ -0.74
SCN3B-206ENST00000530277 ZNF645Q8N7E2 425 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 PARLQ9H300 379 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 GNB4Q9HAV0 340 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 TMEM140Q9NV12 185 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 CA11O75493 328 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 GNG4P50150 75 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 RANP62826 216 aaKnown RBP10.41□□□□□ -0.74
SCN3B-206ENST00000530277 LRRC10Q5BKY1 277 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 GFI1BQ5VTD9 330 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 TRAT1Q6PIZ9 186 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 OR1B1Q8NGR6 318 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 IGHV3-35A0A0C4DH35 117 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 IGKV1-6A0A0C4DH72 117 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 PRR33A8MZF0 331 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 RRHO14718 337 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 TMEM50AO95807 157 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 SRP19P09132 144 aaKnown RBP10.41□□□□□ -0.74
SCN3B-206ENST00000530277 Q8WTZ3 238 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 MS4A10Q96PG2 267 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 PKIBQ9C010 78 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 CALYQ9NYX4 217 aa10.41□□□□□ -0.74
SCN3B-206ENST00000530277 hADV38S2A0JD32 116 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 C1QTNF9BB2RNN3 333 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 CRYABP02511 175 aaKnown RBP10.4□□□□□ -0.74
SCN3B-206ENST00000530277 OR10J1P30954 320 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 PCP4P48539 62 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 RPL30P62888 115 aaKnown RBP10.4□□□□□ -0.74
SCN3B-206ENST00000530277 PPIHO43447 177 aaKnown RBP10.4□□□□□ -0.74
SCN3B-206ENST00000530277 TCTAP57738 103 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 RHOBP62745 196 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 MST1LQ2TV78 715 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 KCNIP2Q9NS61 270 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 S4R3C0 116 aa10.4□□□□□ -0.74
SCN3B-206ENST00000530277 MGST3O14880 152 aa10.4□□□□□ -0.75
SCN3B-206ENST00000530277 CSN3P07498 182 aa10.4□□□□□ -0.75
SCN3B-206ENST00000530277 CYC1P08574 325 aa10.4□□□□□ -0.75
SCN3B-206ENST00000530277 ARL14EPLP0DKL9 152 aa10.4□□□□□ -0.75
SCN3B-206ENST00000530277 MYOD1P15172 320 aa10.4□□□□□ -0.75
SCN3B-206ENST00000530277 ELOVL1Q9BW60 279 aa10.4□□□□□ -0.75
SCN3B-206ENST00000530277 WDR61Q9GZS3 305 aaKnown RBP10.4□□□□□ -0.75
SCN3B-206ENST00000530277 NDUFA2O43678 99 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 ATP5G3P48201 142 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 TAS2R45P59539 299 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 RPL11P62913 178 aaKnown RBP10.39□□□□□ -0.75
SCN3B-206ENST00000530277 PEAR1Q5VY43 1037 aaPredicted RBP10.39□□□□□ -0.75
SCN3B-206ENST00000530277 OR10G8Q8NGN5 311 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 BORCS7Q96B45 105 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 LINC00470Q9BZP3 86 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 TRBV6-7A0A0A0MS04 114 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 SEC14L6B5MCN3 397 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 ACSF3Q4G176 576 aaPredicted RBP10.39□□□□□ -0.75
SCN3B-206ENST00000530277 SLC24A4Q8NFF2 622 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 SH2D2AQ9NP31 389 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 ADAMTS9Q9P2N4 1935 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 PLA2G5P39877 138 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 SUB1P53999 127 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCN3B-206ENST00000530277 ACP7Q6ZNF0 438 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 SIGLECL1Q8N7X8 197 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 OR4D5Q8NGN0 318 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 TMEM45BQ96B21 275 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 SLC25A10Q9UBX3 287 aaPredicted RBP10.39□□□□□ -0.75
SCN3B-206ENST00000530277 OR51B2Q9Y5P1 312 aa10.39□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A10PA6NDY2 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A18PA6NE21 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A16PA6NEW6 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 CBY3A6NI87 242 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A20PA6NIJ5 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A8PA6NJQ4 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A7PA6NKC0 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A22PA8MWA6 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A12PA8MX19 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A5PA8MXJ8 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A23PA8MXZ1 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A15PP0C7V4 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A13PP0C7W8 464 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms