RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SULT1A4P0DMN0 295 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 FAM236CP0DP71 79 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 CD34P28906 385 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 SERPINB1P30740 379 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 SNRPD2P62316 118 aaKnown RBP2.42□□□□□ -2.02
C11orf88-204ENST00000529661 CAV1Q03135 178 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 FABP9Q0Z7S8 132 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 IL15RAQ13261 267 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 IGFBP7Q16270 282 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 ZFAND6Q6FIF0 208 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 ZNF664Q8N3J9 261 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 FER1L6-AS1Q8NA97 138 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 ZFP62Q8NB50 900 aaPredicted RBP2.42□□□□□ -2.02
C11orf88-204ENST00000529661 OR11H6Q8NGC7 330 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 OR8B12Q8NGG6 310 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 OR2T27Q8NH04 317 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 OR13C6PQ8NH95 151 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 RASSF5Q8WWW0 418 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 MAL2Q969L2 176 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 PYURFQ96I23 114 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 KLF6Q99612 283 aaPredicted RBP2.42□□□□□ -2.02
C11orf88-204ENST00000529661 GINS3Q9BRX5 216 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 SHANK2-AS3Q9BTD1 123 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 MIXL1Q9H2W2 232 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 FAM96AQ9H5X1 160 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 UFC1Q9Y3C8 167 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 MRPS16Q9Y3D3 137 aaKnown RBP2.42□□□□□ -2.02
C11orf88-204ENST00000529661 OR51B4Q9Y5P0 310 aa2.42□□□□□ -2.02
C11orf88-204ENST00000529661 ZCCHC11Q5TAX3 1644 aaKnown RBP2.42□□□□□ -2.02
C11orf88-204ENST00000529661 THADAQ6YHU6 1953 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 UBR2Q8IWV8 1755 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 BAZ1BQ9UIG0 1483 aaKnown RBP2.41□□□□□ -2.02
C11orf88-204ENST00000529661 GPR179Q6PRD1 2367 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 IGHV3-21A0A0B4J1V1 117 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 TRAV26-2A0A0B4J265 109 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 OR5H14A6NHG9 310 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 KNCNA6PVL3 124 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 IGLV3-19P01714 112 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 IDO1P14902 403 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 FGF12P61328 243 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 TNFAIP6P98066 277 aaPredicted RBP2.41□□□□□ -2.02
C11orf88-204ENST00000529661 HOXC5Q00444 222 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 C9orf64Q5T6V5 341 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 TMEM136Q6ZRR5 245 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 GRINAQ7Z429 371 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 SGPP2Q8IWX5 399 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 AMN1Q8IY45 258 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 LYPD1Q8N2G4 141 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 SMIM20Q8N5G0 67 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 C12orf29Q8N999 325 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 CT55Q8WUE5 264 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 CNBD2Q96M20 576 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 ZNF286AQ9HBT8 521 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 PRTFDC1Q9NRG1 225 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 CMTM6Q9NX76 183 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 TAAR3PQ9P1P4 343 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 ATG2BQ96BY7 2078 aa2.41□□□□□ -2.02
C11orf88-204ENST00000529661 YTHDC2Q9H6S0 1430 aaKnown RBP2.41□□□□□ -2.02
C11orf88-204ENST00000529661 HECW2Q9P2P5 1572 aa2.4□□□□□ -2.02
C11orf88-204ENST00000529661 KIF13BQ9NQT8 1826 aa2.4□□□□□ -2.02
C11orf88-204ENST00000529661 KIF24Q5T7B8 1368 aa2.4□□□□□ -2.02
C11orf88-204ENST00000529661 DHX57Q6P158 1386 aaKnown RBP2.4□□□□□ -2.02
C11orf88-204ENST00000529661 MYH10P35580 1976 aa2.4□□□□□ -2.02
C11orf88-204ENST00000529661 VPS37CA5D8V6 355 aaPredicted RBP2.4□□□□□ -2.03
C11orf88-204ENST00000529661 LINC00862A6NCI5 91 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 IGLL5B9A064 214 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 K7ERS5 55 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 GPR31O00270 319 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 GSTZ1O43708 216 aaPredicted RBP2.4□□□□□ -2.03
C11orf88-204ENST00000529661 GPR75O95800 540 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 PDYNP01213 254 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 HLA-DRB1P01911 266 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 C1QBP02746 253 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 HMGN1P05114 100 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 SERPINE1P05121 402 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 SERPINA7P05543 415 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 GUSBP08236 651 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 CD7P09564 240 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 S100A2P29034 98 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 DAPP51397 102 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 ENDOGQ14249 297 aaKnown RBP2.4□□□□□ -2.03
C11orf88-204ENST00000529661 C1orf174Q8IYL3 243 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 SLC22A24Q8N4F4 322 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 GDPD1Q8N9F7 314 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 OR4A5Q8NH83 315 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 GNPDA2Q8TDQ7 276 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 OR5P3Q8WZ94 311 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 GNPNAT1Q96EK6 184 aaPredicted RBP2.4□□□□□ -2.03
C11orf88-204ENST00000529661 TSPAN32Q96QS1 320 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 CCL13Q99616 98 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 SEC22CQ9BRL7 303 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 RNASE7Q9H1E1 156 aaKnown RBP2.4□□□□□ -2.03
C11orf88-204ENST00000529661 PARVBQ9HBI1 364 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 CISHQ9NSE2 258 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 C14orf105Q9NVL8 296 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 AK3Q9UIJ7 227 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 UTP11Q9Y3A2 253 aaKnown RBP2.4□□□□□ -2.03
C11orf88-204ENST00000529661 DSCAMO60469 2012 aa2.4□□□□□ -2.03
C11orf88-204ENST00000529661 IGKV1-12A0A0C4DH73 117 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 LEUTXA8MZ59 168 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms