RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 ARPC1AQ92747 370 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 A3GALT2U3KPV4 340 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 DNAH3Q8TD57 4116 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 GABARAPH6UMI1 98 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 M0QYG6 137 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 ZNF701M0R085 212 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.42e-9■■■■■ 36.7
TSPAN4-218ENST00000529566 PGLYRP1O75594 196 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 PF4V1P10720 104 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 TNFSF8P32971 234 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 RAB9AP51151 201 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 TMEM267Q0VDI3 215 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 ASPHD1Q5U4P2 390 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 AADACL3Q5VUY0 350 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 VKORC1L1Q8N0U8 176 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 TCTEX1D1Q8N7M0 179 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 ZNF491Q8N8L2 437 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 KLHL30-AS1Q8NEE0 82 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 FCAMRQ8WWV6 532 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 DCUN1D5Q9BTE7 237 aa12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 TINAGL1Q9GZM7 467 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 C6orf62Q9GZU0 229 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 RSL24D1Q9UHA3 163 aaKnown RBP12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 FOXA2Q9Y261 457 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-218ENST00000529566 CTDSPLO15194 276 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 CD74P04233 296 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 CD3DP04234 171 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 GNB1P62873 340 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 ACTBL2Q562R1 376 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 SAMD5Q5TGI4 173 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 UNQ5815/PRO19632Q6UWF5 114 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 MRPL41Q8IXM3 137 aaKnown RBP12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 SPAG16Q8N0X2 631 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 PUSL1Q8N0Z8 303 aaKnown RBP12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 LINC00482Q8N8I6 264 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 MCFD2Q8NI22 146 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 GRPEL2Q8TAA5 225 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 ABHD5Q8WTS1 349 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 RAX2Q96IS3 184 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 P2RX4Q99571 388 aa12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 ZNF430Q9H8G1 570 aaPredicted RBP12.55□□□□□ -0.4
TSPAN4-218ENST00000529566 A0A1W2PN81 502 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 CCDC160A6NGH7 325 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 CNIH1O95406 144 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 TBPP20226 339 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 CHRNA7P36544 502 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 UCP3P55916 312 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 TSPAN5P62079 268 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 MRPS10P82664 201 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 SSBP1Q04837 148 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 PYHIN1Q6K0P9 492 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 TMEM65Q6PI78 240 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 LHFPL1Q86WI0 220 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 TMEM229BQ8NBD8 167 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 OR4D10Q8NGI6 311 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 OR5M8Q8NGP6 311 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 OR51H1Q8NH63 302 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 CASTOR1Q8WTX7 329 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 BORCS5Q969J3 196 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 RHOVQ96L33 236 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 RSRP1Q9BUV0 290 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 GNB4Q9HAV0 340 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 RABL2AQ9UBK7 228 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 RABL2BQ9UNT1 228 aa12.54□□□□□ -0.4
TSPAN4-218ENST00000529566 MSGN1A6NI15 193 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 G3V4G9 280 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 GPR31O00270 319 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 OR2A4O95047 310 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 PF4P02776 101 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 IL6RP08887 468 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 MYCNOSP40205 109 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 CATR1Q13166 79 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 TMEM167AQ8TBQ9 72 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 DUX3Q96PT4 197 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 OR2A7Q96R45 310 aa12.53□□□□□ -0.4
TSPAN4-218ENST00000529566 I3L521 148 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 CCL24O00175 119 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 GSTZ1O43708 216 aaPredicted RBP12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 KBTBD11O94819 623 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 HPRT1P00492 218 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 HRASP01112 189 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 RLN1P04808 185 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 ZNF735P0CB33 412 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 RUNX1Q01196 453 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 IL18Q14116 193 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 TNXAQ16473 311 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 POU2AF1Q16633 256 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 DEFB136Q30KP8 78 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 ZNF585BQ52M93 769 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 OXLD1Q5BKU9 147 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 RNASE10Q5GAN6 216 aaKnown RBP12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 KPRPQ5T749 579 aaPredicted RBP12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 C1QL4Q86Z23 238 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms