RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 RAB37Q96AX2 223 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 A0A1W2PS18 150 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 LNP1A1A4G5 178 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 LRRC37AA6NMS7 1700 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 EGR1P18146 543 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 ATP5J2P56134 94 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 DNLZQ5SXM8 178 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 PCSK4Q6UW60 755 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 APCDD1LQ8NCL9 501 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 OR1P1Q8NH06 330 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 LSM10Q969L4 123 aaKnown RBP6.92□□□□□ -1.3
CTNND1-220ENST00000529526 SFXN3Q9BWM7 321 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 TCF19Q9Y242 345 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 SHISA3A0PJX4 238 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 GFRA3O60609 400 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 SELENOTP62341 195 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 FAM27E3Q08E93 113 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 HERPUD1Q15011 391 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 C2orf83Q53S99 150 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 RIPPLY2Q5TAB7 128 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 POC1AQ8NBT0 407 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 TMEM45BQ96B21 275 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 KLK15Q9H2R5 256 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF646O15015 1829 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-220ENST00000529526 BRWD3Q6RI45 1802 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 SMAD7O15105 426 aaKnown RBP6.92□□□□□ -1.3
CTNND1-220ENST00000529526 RPS11P62280 158 aaKnown RBP eCLIP6.92□□□□□ -1.3
CTNND1-220ENST00000529526 IFITM2Q01629 132 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 C19orf54Q5BKX5 351 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 C10orf128Q5T292 105 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF385CQ66K41 422 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-220ENST00000529526 STPG3Q8N7X2 389 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 NPIPB3Q92617 1050 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 CLEC7AQ9BXN2 247 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 SMDT1Q9H4I9 107 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 PHLDA3Q9Y5J5 127 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 C8orf88P0DMB2 117 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 COX5BP10606 129 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 PSG9Q00887 426 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 OR9G1Q8NH87 305 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 DUX5Q96PT3 197 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 SSBP3Q9BWW4 388 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF703Q9H7S9 590 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-220ENST00000529526 PTGDSP41222 190 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 FAM181AQ8N9Y4 354 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 OR4C13Q8NGP0 309 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 GRIFINA4D1Z8 144 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF729A6NN14 1252 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-220ENST00000529526 RRHO14718 337 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 FAM74A4Q5TZK3 123 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 OR4A47Q6IF82 309 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 GPR61Q9BZJ8 451 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 PROB1E7EW31 1015 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 NDUFA2O43678 99 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 SYNGR3O43761 229 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 IFI6P09912 130 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 SRIP30626 198 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 PRSS8Q16651 343 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 NABP2Q9BQ15 211 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 AICDAQ9GZX7 198 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 IGHV3-49A0A0A0MS15 119 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 AGAP20933 346 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-220ENST00000529526 GOLT1AQ6ZVE7 132 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 ATOH7Q8N100 152 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 SMIM8Q96KF7 97 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 MIEN1Q9BRT3 115 aa6.91□□□□□ -1.3
CTNND1-220ENST00000529526 F11RQ9Y624 299 aaKnown RBP6.91□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A26D6RGX4 464 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 DANCRP0C864 163 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 LCN2P80188 198 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 PRB3Q04118 309 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-220ENST00000529526 RELQ04864 619 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-220ENST00000529526 LINC00305Q7Z4B0 112 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 PARLQ9H300 379 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 GPX1P07203 203 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 RNASE1P07998 156 aaKnown RBP6.9□□□□□ -1.3
CTNND1-220ENST00000529526 HOXB1P14653 301 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-220ENST00000529526 DLX6P56179 175 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF146Q15072 292 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 ACP7Q6ZNF0 438 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 Q6ZT83 130 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 ZCCHC14Q8WYQ9 949 aaKnown RBP6.9□□□□□ -1.3
CTNND1-220ENST00000529526 DDB2Q92466 427 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF98A6NK75 572 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 K7ERU9 68 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 LIPFP07098 398 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 MBNL2Q5VZF2 373 aaKnown RBP6.9□□□□□ -1.3
CTNND1-220ENST00000529526 OR51G1Q8NGK1 321 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 SPSB4Q96A44 273 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 TMEM186Q96B77 213 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF837Q96EG3 531 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-220ENST00000529526 TAF1LQ8IZX4 1826 aa6.9□□□□□ -1.3
CTNND1-220ENST00000529526 FOXI3A8MTJ6 420 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-220ENST00000529526 IFNL4K9M1U5 179 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 IL4P05112 153 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 CELA3BP08861 270 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 ZNF708P17019 499 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms