RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 VSTM2AQ8TAG5 236 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 MRAPQ8TCY5 172 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 SECTM1Q8WVN6 248 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 BORCS5Q969J3 196 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 RHOVQ96L33 236 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 DCUN1D5Q9BTE7 237 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 CCL28Q9NRJ3 127 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 MEIS3P1A6NDR6 274 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 RAMP3O60896 148 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 TRGV3P03979 118 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 EIF4EP06730 217 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 BRWD1-AS2P59051 145 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 TPPP2P59282 170 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 TAS2R46P59540 309 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 DYRK1AQ13627 763 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 ASPHD1Q5U4P2 390 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 MMD2Q8IY49 270 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 POC5Q8NA72 575 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR5T1Q8NG75 326 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 GPX8Q8TED1 209 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 TCTEX1D2Q8WW35 142 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 AP3S1Q92572 193 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 MS4A10Q96PG2 267 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR5B12Q96R08 314 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 AIFM2Q9BRQ8 373 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 SLC5A7Q9GZV3 580 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 SCPEP1Q9HB40 452 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 TAS2R8Q9NYW2 309 aa9.38□□□□□ -0.91
TRAPPC4-209ENST00000528230 A0A0G2JLM5 398 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 MSGN1A6NI15 193 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 LINC01619G3V211 115 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 SULT1C2O00338 296 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 RBFOX2O43251 390 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 ACTL6BO94805 426 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR2A4O95047 310 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 HRASP01112 189 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 HSPB1P04792 205 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 FCER2P06734 321 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 SAA1P0DJI8 122 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 ZNF182P17025 639 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 HOXD3P31249 432 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 INSL3P51460 131 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 CATR1Q13166 79 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 TNXAQ16473 311 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 GPR107Q5VW38 600 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 GPR141Q7Z602 305 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 LYSMD2Q8IV50 215 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 CASTOR1Q8WTX7 329 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR2A7Q96R45 310 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 NAA50Q9GZZ1 169 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 ZNF430Q9H8G1 570 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 ZNF355PQ9NSJ1 428 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 EHFQ9NZC4 300 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 ADAM30Q9UKF2 790 aa9.37□□□□□ -0.91
TRAPPC4-209ENST00000528230 SEC14L6B5MCN3 397 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 K7EIL1 84 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 HPGDSO60760 199 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 TPPPO94811 219 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 ELK1P19419 428 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 MAS1LP35410 378 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 RFX2P48378 723 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 FXYD4P59646 89 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 HERV-K104P61576 105 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 DGCR2P98153 550 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR2B11Q5JQS5 317 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 IDO2Q6ZQW0 420 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 PUSL1Q8N0Z8 303 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR5H2Q8NGV7 314 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR6F1Q8NGZ6 308 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 TMEM167AQ8TBQ9 72 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 CD300LFQ8TDQ1 290 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 MOB3AQ96BX8 217 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 USMG5Q96IX5 58 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 PHB2Q99623 299 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 SPIN2AQ99865 258 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 SPIN2BQ9BPZ2 258 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 TINAGL1Q9GZM7 467 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 SCOCQ9UIL1 159 aa9.36□□□□□ -0.91
TRAPPC4-209ENST00000528230 C13orf42A0A1B0GVH6 325 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 WI2-2373I1.2A0A1W2PRP0 233 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 OVOL1O14753 267 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 KBTBD11O94819 623 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 HPRT1P00492 218 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 IGHV3-11P01762 117 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 PMP2P02689 132 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR9G9P0C7N8 305 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 GNRHRP30968 328 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 DCTN2Q13561 401 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 ZNF818PQ6ZRF7 136 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 SPAG16Q8N0X2 631 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 ADAD2Q8NCV1 583 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR4A5Q8NH83 315 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 C15orf40Q8WUR7 153 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 DCUN1D4Q92564 292 aa9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 ZNF2Q9BSG1 426 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 ALX4Q9H161 411 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 RANGRFQ9HD47 186 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-209ENST00000528230 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
TRAPPC4-209ENST00000528230 A0A087WW49 117 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms