RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 VKORC1L1Q8N0U8 176 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 TEX45Q8NA69 505 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 OR13F1Q8NGS4 319 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 DLX4Q92988 240 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-213ENST00000527897 PRR25Q96S07 402 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 ANKRD34BA5PLL1 514 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 MSGN1A6NI15 193 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 PPYP01298 95 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 IGLV2-14P01704 120 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 PRSS8Q16651 343 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 OR4S2Q8NH73 311 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 SNAPC3Q92966 411 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 HSD17B10Q99714 261 aaKnown RBP12.01□□□□□ -0.49
CAPN1-213ENST00000527897 SLC5A7Q9GZV3 580 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 CCL28Q9NRJ3 127 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 COMMD3Q9UBI1 195 aa12.01□□□□□ -0.49
CAPN1-213ENST00000527897 RAMP3O60896 148 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 SAP30O75446 220 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 TAS2R20P59543 309 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 CDK10Q15131 360 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 TMEM17Q86X19 198 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 MFSD4AQ8N468 514 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 OR5AP2Q8NGF4 316 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 SRSF12Q8WXF0 261 aaKnown RBP12□□□□□ -0.49
CAPN1-213ENST00000527897 SLC25A46Q96AG3 418 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 RHOVQ96L33 236 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 ZNF430Q9H8G1 570 aaPredicted RBP12□□□□□ -0.49
CAPN1-213ENST00000527897 EHFQ9NZC4 300 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 SCOCQ9UIL1 159 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 TNCP24821 2201 aa12□□□□□ -0.49
CAPN1-213ENST00000527897 A0A0G2JLM5 398 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 TRIM64CA6NLI5 447 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 CREBL2O60519 120 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-213ENST00000527897 HSPB1P04792 205 aaKnown RBP11.99□□□□□ -0.49
CAPN1-213ENST00000527897 HERV-K104P61576 105 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 CD69Q07108 199 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 MRGPRG-AS1Q2M3A8 158 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 SSX9Q7RTT3 188 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 OVCH2Q7RTZ1 564 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 TMEM68Q96MH6 324 aa11.99□□□□□ -0.49
CAPN1-213ENST00000527897 H3BUA1 57 aa11.98□□□□□ -0.49
CAPN1-213ENST00000527897 PMP2P02689 132 aa11.98□□□□□ -0.49
CAPN1-213ENST00000527897 EIF4EP06730 217 aaKnown RBP11.98□□□□□ -0.49
CAPN1-213ENST00000527897 RFX2P48378 723 aa11.98□□□□□ -0.49
CAPN1-213ENST00000527897 ZNF66Q6ZN08 573 aa11.98□□□□□ -0.49
CAPN1-213ENST00000527897 MMD2Q8IY49 270 aa11.98□□□□□ -0.49
CAPN1-213ENST00000527897 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
CAPN1-213ENST00000527897 SMIM31A0A1B0GVY4 71 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 SULT1C2O00338 296 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 OR2A4O95047 310 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 PRH1P02810 166 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 OR9G9P0C7N8 305 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 SMIM18P0DKX4 95 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 PRSS3P35030 304 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 INSL3P51460 131 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 EIF4EBP1Q13541 118 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-213ENST00000527897 ZNF429Q86V71 674 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 SNX29P2Q8IUI4 249 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 SPAG16Q8N0X2 631 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 OR5H2Q8NGV7 314 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 OR51H1Q8NH63 302 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 FYTTD1Q96QD9 318 aaKnown RBP11.97□□□□□ -0.49
CAPN1-213ENST00000527897 OR2A7Q96R45 310 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 RSRP1Q9BUV0 290 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 TINAGL1Q9GZM7 467 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-213ENST00000527897 NAA50Q9GZZ1 169 aaKnown RBP11.97□□□□□ -0.49
CAPN1-213ENST00000527897 ZNF256Q9Y2P7 627 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-213ENST00000527897 COL7A1Q02388 2944 aa11.97□□□□□ -0.49
CAPN1-213ENST00000527897 HMX3A6NHT5 357 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 HPGDSO60760 199 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 KBTBD11O94819 623 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 HRASP01112 189 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 KIR2DS2P43631 304 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 BRWD1-AS2P59051 145 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 CATR1Q13166 79 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 DCTN2Q13561 401 aaKnown RBP11.96□□□□□ -0.49
CAPN1-213ENST00000527897 GPR107Q5VW38 600 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 ZNF818PQ6ZRF7 136 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 ADAD2Q8NCV1 583 aaKnown RBP11.96□□□□□ -0.49
CAPN1-213ENST00000527897 GIMAP1Q8WWP7 306 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 OR4C12Q96R67 309 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 SPIN2AQ99865 258 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 SPIN2BQ9BPZ2 258 aa11.96□□□□□ -0.49
CAPN1-213ENST00000527897 ZNF2Q9BSG1 426 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-213ENST00000527897 RANGRFQ9HD47 186 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-213ENST00000527897 DPPA5A6NC42 116 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 FAM25AB3EWG3 89 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 FAM25CB3EWG5 89 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 FAM25GB3EWG6 89 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 ZP3P21754 424 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 HLA-DMAP28067 261 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 RPL27AP46776 148 aaKnown RBP11.95□□□□□ -0.5
CAPN1-213ENST00000527897 RORCP51449 518 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 RNASE12Q5GAN4 147 aaKnown RBP11.95□□□□□ -0.5
CAPN1-213ENST00000527897 AADACL3Q5VUY0 350 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 HAPLN4Q86UW8 402 aa11.95□□□□□ -0.5
CAPN1-213ENST00000527897 ZBTB34Q8NCN2 500 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms