RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 Q6ZS49 121 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 SPIN2AQ99865 258 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 SPIN2BQ9BPZ2 258 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 ZNF430Q9H8G1 570 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 NDUFB11Q9NX14 153 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 SIGLEC8Q9NYZ4 499 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 PRELID3BQ9Y3B1 194 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 FAM223BA6NKX1 122 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 CTXN2P0C2S0 81 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 NFYAP23511 347 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 DTYMKP23919 212 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 EXOSC2Q13868 293 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 CDK10Q15131 360 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 OR2B11Q5JQS5 317 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 IZUMO2Q6UXV1 221 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 FAM223AQ8IWN6 122 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 MMD2Q8IY49 270 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 ZNF645Q8N7E2 425 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 OR2W1Q9Y3N9 320 aa17.02■□□□□ 0.32
TRAPPC4-208ENST00000527680 IZUMO1RA6ND01 250 aa17.01■□□□□ 0.31
TRAPPC4-208ENST00000527680 SAA1P0DJI8 122 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC4-208ENST00000527680 HSPA13P48723 471 aa17.01■□□□□ 0.31
TRAPPC4-208ENST00000527680 KCTD9Q7L273 389 aa17.01■□□□□ 0.31
TRAPPC4-208ENST00000527680 MRPS7Q9Y2R9 242 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-208ENST00000527680 AIREO43918 545 aa17■□□□□ 0.31
TRAPPC4-208ENST00000527680 CD36P16671 472 aa17■□□□□ 0.31
TRAPPC4-208ENST00000527680 HACD4Q5VWC8 232 aa17■□□□□ 0.31
TRAPPC4-208ENST00000527680 SLC25A42Q86VD7 318 aa17■□□□□ 0.31
TRAPPC4-208ENST00000527680 EDA2RQ9HAV5 297 aa17■□□□□ 0.31
TRAPPC4-208ENST00000527680 DPPA5A6NC42 116 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 BMPR1BO00238 502 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 OR2J3O76001 311 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 SLC22A5O76082 557 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 ZNF45Q02386 682 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 VKORC1L1Q8N0U8 176 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 TTC9CQ8N5M4 171 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 NECAP1Q8NC96 275 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 DYNLRB2Q8TF09 96 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 OR51E2Q9H255 320 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 DCSTAMPQ9H295 470 aa16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 RBMX2Q9Y388 322 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-208ENST00000527680 TRBV9A0A0B4J1U6 114 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 HLA-DQB1P01920 261 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 GALP22466 123 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 CD81P60033 236 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 C10orf55Q5SWW7 151 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 NR2C2APQ86WQ0 139 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 OR2K2Q8NGT1 345 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 NUDCD2Q8WVJ2 157 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 THAP7Q9BT49 309 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 SPATA2Q9UM82 520 aa16.98■□□□□ 0.31
TRAPPC4-208ENST00000527680 DNAH7Q8WXX0 4024 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 LCE6AA0A183 80 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 HMX3A6NHT5 357 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 NOTOA8MTQ0 251 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 TPPPO94811 219 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 GNG2P59768 71 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 RPL30P62888 115 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 C15orf32Q32M92 178 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 CD300EQ496F6 205 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 CNIH2Q6PI25 160 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 TCTEX1D2Q8WW35 142 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 KCTD12Q96CX2 325 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 FYTTD1Q96QD9 318 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 PLEKHA3Q9HB20 300 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 SLC2A8Q9NY64 477 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 DAPK2Q9UIK4 370 aa16.97■□□□□ 0.31
TRAPPC4-208ENST00000527680 TMEM235A6NFC5 223 aa16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 PSMB9P28065 219 aa16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 MECP2P51608 486 aaKnown RBP16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 OR4S2Q8NH73 311 aa16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 VSTM2AQ8TAG5 236 aa16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 OR2A7Q96R45 310 aa16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 HSD17B10Q99714 261 aaKnown RBP16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 NEURL2Q9BR09 285 aa16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 TXNL4BQ9NX01 149 aaKnown RBP16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 FBXL7Q9UJT9 491 aa16.96■□□□□ 0.31
TRAPPC4-208ENST00000527680 IGKV1D-13A0A0B4J2D9 117 aa16.95■□□□□ 0.3
TRAPPC4-208ENST00000527680 PPP5D1E7EU14 171 aa16.95■□□□□ 0.3
TRAPPC4-208ENST00000527680 SCGNO76038 276 aa16.95■□□□□ 0.3
TRAPPC4-208ENST00000527680 IGKV1-13P0DP09 117 aa16.95■□□□□ 0.3
TRAPPC4-208ENST00000527680 GUCA2BQ16661 112 aa16.95■□□□□ 0.3
TRAPPC4-208ENST00000527680 FAM209BQ5JX69 171 aa16.95■□□□□ 0.3
TRAPPC4-208ENST00000527680 ZNF257Q9Y2Q1 563 aa16.95■□□□□ 0.3
TRAPPC4-208ENST00000527680 CEPT1Q9Y6K0 416 aa16.95■□□□□ 0.3
TRAPPC4-208ENST00000527680 GGCTO75223 188 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 OR2C1O95371 312 aa16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 HLA-AP01891 365 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 RPL27AP46776 148 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 TPRA1Q86W33 373 aa16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 MFSD4AQ8N468 514 aa16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 TAS2R8Q9NYW2 309 aa16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 ANXA10Q9UJ72 324 aa16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 RAB26Q9ULW5 256 aa16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 SSR3Q9UNL2 185 aa16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 RRP15Q9Y3B9 282 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-208ENST00000527680 ZNF785A8K8V0 405 aa16.93■□□□□ 0.3
TRAPPC4-208ENST00000527680 KBTBD11O94819 623 aa16.93■□□□□ 0.3
TRAPPC4-208ENST00000527680 IGLV2-14P01704 120 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms