RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 VSTM2AQ8TAG5 236 aa10.47□□□□□ -0.73
CAPN1-209ENST00000527469 VSIG4Q9Y279 399 aa10.47□□□□□ -0.73
CAPN1-209ENST00000527469 FBXO7Q9Y3I1 522 aa10.47□□□□□ -0.73
CAPN1-209ENST00000527469 PLXNB1O43157 2135 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 SRRM4A7MD48 611 aaKnown RBP10.46□□□□□ -0.73
CAPN1-209ENST00000527469 G3V4G9 280 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 CTDSP2O14595 271 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 IGLV1-40P01703 118 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 SAA1P0DJI8 122 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-209ENST00000527469 RAB9AP51151 201 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 PRSS8Q16651 343 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 DHRS11Q6UWP2 260 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 ZNF818PQ6ZRF7 136 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 C18orf65Q6ZTR6 163 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 LAX1Q8IWV1 398 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 MMD2Q8IY49 270 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 SPAG16Q8N0X2 631 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 OR51H1Q8NH63 302 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 DYNC2LI1Q8TCX1 351 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 CD300LFQ8TDQ1 290 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 C4orf3Q8WVX3 66 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 MOB3AQ96BX8 217 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 DIRAS2Q96HU8 199 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 UBE2E2Q96LR5 201 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 GPHA2Q96T91 129 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 NUBP2Q9Y5Y2 271 aa10.46□□□□□ -0.73
CAPN1-209ENST00000527469 CCL24O00175 119 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 CRYGBP07316 175 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 CRIP2P52943 208 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-209ENST00000527469 TPPP2P59282 170 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 MRPS10P82664 201 aaKnown RBP10.45□□□□□ -0.74
CAPN1-209ENST00000527469 IL18Q14116 193 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 DEFB136Q30KP8 78 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 RNASE10Q5GAN6 216 aaKnown RBP10.45□□□□□ -0.74
CAPN1-209ENST00000527469 LPCAT3Q6P1A2 487 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 SSX9Q7RTT3 188 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 LYSMD2Q8IV50 215 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 MRPL41Q8IXM3 137 aaKnown RBP10.45□□□□□ -0.74
CAPN1-209ENST00000527469 VKORC1L1Q8N0U8 176 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 OR52I2Q8NH67 350 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 MCFD2Q8NI22 146 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 CASTOR1Q8WTX7 329 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 DPF1Q92782 380 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 RCC1LQ96I51 464 aaKnown RBP10.45□□□□□ -0.74
CAPN1-209ENST00000527469 RAX2Q96IS3 184 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 TMEM68Q96MH6 324 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 MS4A10Q96PG2 267 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 OR5B12Q96R08 314 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 GPR61Q9BZJ8 451 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 KLK15Q9H2R5 256 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 MIXL1Q9H2W2 232 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 RABL2AQ9UBK7 228 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-209ENST00000527469 RABL2BQ9UNT1 228 aa10.45□□□□□ -0.74
CAPN1-209ENST00000527469 MSGN1A6NI15 193 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 M0QYG6 137 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 GPR31O00270 319 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 ARPC1BO15143 372 aaKnown RBP10.44□□□□□ -0.74
CAPN1-209ENST00000527469 RBFOX2O43251 390 aaKnown RBP eCLIP10.44□□□□□ -0.74
CAPN1-209ENST00000527469 OR2A4O95047 310 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 DUS4LO95620 317 aaKnown RBP10.44□□□□□ -0.74
CAPN1-209ENST00000527469 RLN1P04808 185 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 EGR2P11161 476 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-209ENST00000527469 IGLL1P15814 213 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 TBPP20226 339 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 GNRHRP30968 328 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 EIF4EBP1Q13541 118 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-209ENST00000527469 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 LINC00482Q8N8I6 264 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 ZNF491Q8N8L2 437 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 WFDC9Q8NEX5 89 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 OR5T1Q8NG75 326 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 RHOVQ96L33 236 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 DUX3Q96PT4 197 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 OR2A7Q96R45 310 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 ABHD1Q96SE0 405 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 SPIN2AQ99865 258 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 SPIN2BQ9BPZ2 258 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 MCRIP2Q9BUT9 160 aaKnown RBP10.44□□□□□ -0.74
CAPN1-209ENST00000527469 SLA2Q9H6Q3 261 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 ZNF430Q9H8G1 570 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-209ENST00000527469 HRASLSQ9HDD0 168 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 COA4Q9NYJ1 87 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 KLK11Q9UBX7 282 aa10.44□□□□□ -0.74
CAPN1-209ENST00000527469 DPPA5A6NC42 116 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 GABARAPH6UMI1 98 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 SOX15O60248 233 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 RAMP3O60896 148 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 HPRT1P00492 218 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 TRGV3P03979 118 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 APELAP0DMC3 54 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 PGAM2P15259 253 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 TAS2R19P59542 299 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 ERVK-16P61578 105 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 PHLDA2Q53GA4 152 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 C19orf54Q5BKX5 351 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 VAX1Q5SQQ9 334 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 SAMD5Q5TGI4 173 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 ETV3LQ6ZN32 361 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 SLC38A6Q8IZM9 456 aa10.43□□□□□ -0.74
CAPN1-209ENST00000527469 OR11H1Q8NG94 326 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms