RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 OR11G2Q8NGC1 345 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 DNAJC30Q96LL9 226 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 SMIM14Q96QK8 99 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 FIZ1Q96SL8 496 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 DPH3P1Q9H4G8 78 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 TNFRSF19Q9NS68 423 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 EPDR1Q9UM22 224 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 PRR32B1ATL7 298 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 CEACAM4O75871 244 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 CRYBB3P26998 211 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 C2orf82Q6UX34 121 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 DIRC2Q96SL1 478 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 OVOL2Q9BRP0 275 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 SH3BGRL3Q9H299 93 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 ST20Q9HBF5 79 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 FSCN3Q9NQT6 498 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 PSME4Q14997 1843 aa6.26□□□□□ -1.41
CTNND1-216ENST00000527467 PRRC2BQ5JSZ5 2229 aaKnown RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 ATAD5Q96QE3 1844 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 CCL21O00585 134 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 SNRPCP09234 159 aaKnown RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 CXCL2P19875 107 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 ASIPP42127 132 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 RPL27AP46776 148 aaKnown RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 ZNF83P51522 516 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 RPS11P62280 158 aaKnown RBP eCLIP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 RBMY1FQ15415 496 aaKnown RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 ZNF660Q6AZW8 331 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 GAGE2AQ6NT46 116 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 FDCSPQ8NFU4 85 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 TAF15Q92804 592 aaKnown RBP eCLIP6.25□□□□□ -1.413e-8■■■□□ 14.9
CTNND1-216ENST00000527467 C10orf35Q96D05 121 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 MVB12AQ96EY5 273 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 VKORC1Q9BQB6 163 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 FOXD3Q9UJU5 478 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 SIGLEC7Q9Y286 467 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 PRR19A6NJB7 356 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 F8WEM9 126 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 NCR2O95944 276 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 ZNF32P17041 273 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 ZNF774Q6NX45 483 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 PAQR9Q6ZVX9 377 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 ADAD2Q8NCV1 583 aaKnown RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 LRRC61Q9BV99 259 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 C19orf24Q9BVV8 132 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 CST9LQ9H4G1 147 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 MMP25Q9NPA2 562 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 CCL27Q9Y4X3 112 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 KLF12Q9Y4X4 402 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 V9GYH0 126 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 CAPZBP47756 277 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 CLDN10P78369 228 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 INSL4Q14641 139 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 SEPSECSQ9HD40 501 aaKnown RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 TRAV9-1A0A075B6T8 112 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 SOCS1O15524 211 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 CD8AP01732 235 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 VAX1Q5SQQ9 334 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 SAP25Q8TEE9 199 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 SLC26A1Q9H2B4 701 aa6.25□□□□□ -1.41
CTNND1-216ENST00000527467 SLC25A10Q9UBX3 287 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-216ENST00000527467 TRAV30A0A087WSZ9 112 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 C1QL1O75973 258 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 ZNF688P0C7X2 276 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 MALP21145 153 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 LY6DQ14210 128 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 GPR146Q96CH1 333 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 DPM2O94777 84 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 APELAP0DMC3 54 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 ZNF114Q8NC26 417 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 SSBP3Q9BWW4 388 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-216ENST00000527467 JPT2Q9H910 190 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 IL36BQ9NZH7 164 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 MICAL3Q7RTP6 2002 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 ITGB1BP1O14713 200 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 SPINT1O43278 529 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 CD1AP06126 327 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 C1QTNF9P0C862 333 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 DUTP33316 252 aaKnown RBP6.24□□□□□ -1.41
CTNND1-216ENST00000527467 MIC13Q5XKP0 118 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 LINC00596Q86U02 117 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 APCDD1LQ8NCL9 501 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 OR51G1Q8NGK1 321 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 DLX4Q92988 240 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-216ENST00000527467 NPCDR1Q9BY65 106 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 RNF122Q9H9V4 155 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 NRN1Q9NPD7 142 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 CISD3P0C7P0 127 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 EFNB2P52799 333 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 DPTQ07507 201 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 C1orf122Q6ZSJ8 110 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 C17orf47Q8NEP4 570 aa6.24□□□□□ -1.41
CTNND1-216ENST00000527467 EAF1Q96JC9 268 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-216ENST00000527467 TMEFF2Q9UIK5 374 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-216ENST00000527467 ANAPC10Q9UM13 185 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms