RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, human

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP3-208	ENST00000527339	CD3D	P04234	171 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	IFNA6	P05013	189 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	PPIF	P30405	207 aa	Known RBP	13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	BRWD1-AS2	P59051	145 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	TAS2R19	P59542	299 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	BEAN1	Q3B7T3	259 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	LPCAT3	Q6P1A2	487 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	ARRDC1	Q8N5I2	433 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	RNF152	Q8N8N0	203 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	TMEM229B	Q8NBD8	167 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	ABHD5	Q8WTS1	349 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	R3HDM4	Q96D70	268 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	FBXO7	Q9Y3I1	522 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	WSB1	Q9Y6I7	421 aa		13.59	□□□□□ -0.23
LTBP3-208	ENST00000527339	FABP12	A6NFH5	140 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	GPR31	O00270	319 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	2e-7	■□□□□ 9.8
LTBP3-208	ENST00000527339	SAA1	P0DJI8	122 aa	Predicted RBP	13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	RPL23A	P62750	156 aa	Known RBP	13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	C19orf54	Q5BKX5	351 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	CMTM1	Q8IZ96	169 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	TCTEX1D1	Q8N7M0	179 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	MINDY2	Q8NBR6	621 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	ARPC1A	Q92747	370 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	SOST	Q9BQB4	213 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	NUBP2	Q9Y5Y2	271 aa		13.58	□□□□□ -0.24
LTBP3-208	ENST00000527339	GSTZ1	O43708	216 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	CREBL2	O60519	120 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	CD74	P04233	296 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	EGR2	P11161	476 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	PSMB8	P28062	276 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	SLC6A1	P30531	599 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	S100A5	P33763	92 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	UCP3	P55916	312 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	PJVK	Q0ZLH3	352 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	FXYD3	Q14802	87 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	ECSCR	Q19T08	205 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	AKIRIN2	Q53H80	203 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	AADACL3	Q5VUY0	350 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	SPAG16	Q8N0X2	631 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	OR51H1	Q8NH63	302 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	VSTM2A	Q8TAG5	236 aa		13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	DGCR14	Q96DF8	476 aa	Known RBP	13.57	□□□□□ -0.24
LTBP3-208	ENST00000527339	ARPC1B	O15143	372 aa	Known RBP	13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	PGLYRP1	O75594	196 aa	Predicted RBP	13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	CNIH1	O95406	144 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	RAB3D	O95716	219 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	HRAS	P01112	189 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	IGLV1-40	P01703	118 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	RPLP1	P05386	114 aa	Known RBP	13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	PF4V1	P10720	104 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	S100G	P29377	79 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	GNB1	P62873	340 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	SSBP2	P81877	361 aa	Predicted RBP	13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	PRSS8	Q16651	343 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	MRGPRG-AS1	Q2M3A8	158 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	STEAP1B	Q6NZ63	245 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	IDO2	Q6ZQW0	420 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	SLC38A6	Q8IZM9	456 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	POC5	Q8NA72	575 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	GRPEL2	Q8TAA5	225 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	CD300LF	Q8TDQ1	290 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	AIFM2	Q9BRQ8	373 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	FAM103A1	Q9BTL3	118 aa	Known RBP	13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	RSRP1	Q9BUV0	290 aa		13.56	□□□□□ -0.24
LTBP3-208	ENST00000527339	COL7A1	Q02388	2944 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339		A0A1W2PN81	502 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	RAMP3	O60896	148 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	HPRT1	P00492	218 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	RLN1	P04808	185 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	CHRNA7	P36544	502 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	MEF2D	Q14814	521 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	UNQ5815/PRO19632	Q6UWF5	114 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	LHFPL1	Q86WI0	220 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	MMD2	Q8IY49	270 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	LFNG	Q8NES3	379 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	RHOV	Q96L33	236 aa		13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	FOXA2	Q9Y261	457 aa	Predicted RBP	13.55	□□□□□ -0.24
LTBP3-208	ENST00000527339	DPPA5	A6NC42	116 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	NUDT19	A8MXV4	375 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	KBTBD11	O94819	623 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	OR2A4	O95047	310 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	CDX1	P47902	265 aa	Predicted RBP	13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	TAS2R31	P59538	309 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	KPRP	Q5T749	579 aa	Predicted RBP	13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	TMEM65	Q6PI78	240 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	LCNL1	Q6ZST4	164 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	ZNF695	Q8IW36	515 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	VKORC1L1	Q8N0U8	176 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	PUSL1	Q8N0Z8	303 aa	Known RBP	13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	KLHL30-AS1	Q8NEE0	82 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	OR4D10	Q8NGI6	311 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	OR5M8	Q8NGP6	311 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	MYOZ3	Q8TDC0	251 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	TMEM68	Q96MH6	324 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	OR2A7	Q96R45	310 aa		13.54	□□□□□ -0.24
LTBP3-208	ENST00000527339	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.54	□□□□□ -0.24

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