RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SCN5AQ14524 2016 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 DOCK8Q8NF50 2099 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 IGLV3-22A0A075B6J6 115 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TRBV9A0A0B4J1U6 114 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A1W2PPM0 123 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A1W2PQF6 199 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF732B4DXR9 585 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 J3KT08 172 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 SLC16A7O60669 478 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 KBTBD11O94819 623 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 MOSP00540 346 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 HLA-DQA2P01906 255 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 RHOCP08134 193 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 CD55P08174 381 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 BCL2P10415 239 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 FABP2P12104 132 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 MYF5P13349 255 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 IGLL1P15814 213 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 HIST1H1CP16403 213 aaKnown RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 CST5P28325 142 aaPredicted RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 HRH1P35367 487 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 CXCL12P48061 93 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 LIM2P55344 173 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF121P58317 390 aaPredicted RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 PPP1CBP62140 327 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 RPS11P62280 158 aaKnown RBP eCLIP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 SLC35B1P78383 322 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 POU3F1Q03052 451 aaPredicted RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 MEF2CQ06413 473 aaPredicted RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 FMODQ06828 376 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 PSG7Q13046 419 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF146Q15072 292 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF77Q15935 545 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 CDO1Q16878 200 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 GGTA1PQ4G0N0 100 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 OR10J3Q5JRS4 329 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 KHDC1LQ5JSQ8 128 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 GLYATL3Q5SZD4 288 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF684Q5T5D7 378 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TRIM40Q6P9F5 258 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF474Q6S9Z5 364 aaPredicted RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 SHISA6Q6ZSJ9 500 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 Q6ZUT4 128 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 OSR2Q8N2R0 312 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 RYBPQ8N488 228 aaPredicted RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 SPEM1Q8N4L4 309 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TEX29Q8N6K0 151 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TMEM99Q8N816 258 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 BCORP1Q8N888 145 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 OR10G6Q8NH81 332 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 OR1L3Q8NH93 324 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 SGMS2Q8NHU3 365 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 MAFAQ8NHW3 353 aaPredicted RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF502Q8TBZ5 544 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNRF4Q8WWF5 429 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ST8SIA1Q92185 356 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 MAL2Q969L2 176 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 KCNS1Q96KK3 526 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 SCGB3A2Q96PL1 93 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 CDX2Q99626 313 aaPredicted RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 PAAF1Q9BRP4 392 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 MCRIP2Q9BUT9 160 aaKnown RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 PARP12Q9H0J9 701 aaKnown RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 OR2D2Q9H210 308 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 MS4A6AQ9H2W1 248 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 IFI27L2Q9H2X8 130 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 PLEKHF2Q9H8W4 249 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 CALHM2Q9HA72 323 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 SH2D2AQ9NP31 389 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TMEM30AQ9NV96 361 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TAAR3PQ9P1P4 343 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 LHX3Q9UBR4 397 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 PIGLQ9Y2B2 252 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF257Q9Y2Q1 563 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 PTRH2Q9Y3E5 179 aaKnown RBP3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TMEM131Q92545 1883 aa3.07□□□□□ -1.92
CLNS1A-209ENST00000527299 TRAV18A0A075B6X5 111 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 TRGV10A0A0A0MS01 117 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A1W2PP11 408 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 A0A1W2PPC4 97 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 SSC5DA1L4H1 1573 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 VWA8A3KMH1 1905 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 MEIS3P1A6NDR6 274 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 LIPT2A6NK58 231 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 FOXI3A8MTJ6 420 aaPredicted RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 FNDC10F2Z333 226 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CCDC179H3BU77 68 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 RHODO00212 210 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 PLPP3O14495 311 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 SH2D1BO14796 132 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 PIN1P1O15428 100 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 SOCS1O15524 211 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 ST8SIA3O43173 380 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 SPRY1O43609 319 aaPredicted RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF324O75467 553 aaPredicted RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 STK17BO94768 372 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CPSF4O95639 269 aaKnown RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CA2P00918 260 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms