RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 ARFGEF3Q5TH69 2177 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 IGSF23A1L1A6 192 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 RBFOX3A6NFN3 312 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 LYNX1G3V0Z9 82 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 FSTL3O95633 263 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 LYNX1P0DP58 116 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 NCR3LG1Q68D85 454 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 CTSZQ9UBR2 303 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 HCFC1P51610 2035 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 A0A1W2PPE3 182 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 KIAA1324LA8MWY0 1029 aaPredicted RBP13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 MMP23AO75900 390 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 DAOP14920 347 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 SULT1A1P50225 295 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 LINC00205P59089 165 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 RPL23AP62750 156 aaKnown RBP13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 TLE4Q04727 773 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 LYG1Q8N1E2 194 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 FBXO7Q9Y3I1 522 aa13.34□□□□□ -0.27
SNRNP35-204ENST00000527158 RELNP78509 3460 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 SYNGR2O43760 224 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 FCGR3BO75015 233 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 FCN3O75636 299 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 IFNA17P01571 189 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 KIR2DS2P43631 304 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 GNG10P50151 68 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 SNRPEP62304 92 aaKnown RBP13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 UTF1Q5T230 341 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 HEPN1Q6WQI6 88 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 H2BFWTQ7Z2G1 175 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 ZNF439Q8NDP4 499 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 RAB39BQ96DA2 213 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 S1PR3Q99500 378 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 TANC2Q9HCD6 1990 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 KALRNO60229 2985 aa13.33□□□□□ -0.28
SNRNP35-204ENST00000527158 A0A087WWC5 75 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 FAM90A26D6RGX4 464 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 HPRT1P00492 218 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 FHITP49789 147 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 MRPS11P82912 194 aaKnown RBP13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 ATP5SQ99766 215 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 SAA2-SAA4A0A096LPE2 208 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 RBFOX2O43251 390 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 C1QL1O75973 258 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 TMEM50AO95807 157 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 HSPB1P04792 205 aaKnown RBP13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 P0C879 139 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 SAA2P0DJI9 122 aaPredicted RBP13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 CCL3L1P16619 93 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 AKR1C8PQ5T2L2 129 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 C11orf71Q6IPW1 123 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 SLC25A48Q6ZT89 311 aaKnown RBP13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 STX12Q86Y82 276 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 OR5C1Q8NGR4 320 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 NEU4Q8WWR8 484 aaPredicted RBP13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 WSB1Q9Y6I7 421 aa13.32□□□□□ -0.28
SNRNP35-204ENST00000527158 DSCAML1Q8TD84 2053 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 MARCH11A6NNE9 402 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 SOD3P08294 240 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 ADTRPQ96IZ2 230 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 TRAV1-1A0A0B4J248 108 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 A0A1W2PPH5 198 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 IGHV2-70P01814 119 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 THBS3P49746 956 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 PAX9P55771 341 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 ZNF506Q5JVG8 444 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 ETV3LQ6ZN32 361 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 OR10G4Q8NGN3 311 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 R3HDM4Q96D70 268 aa13.31□□□□□ -0.28
SNRNP35-204ENST00000527158 TRBV23-1A0A0A0MS06 115 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 CXorf65A6NEN9 183 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 IFNA5P01569 189 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 AKR1C3P42330 323 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 DYNLT3P51808 116 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 TAS2R30P59541 319 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 SPSB3Q6PJ21 355 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 DTX2Q86UW9 622 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 ODF3L1Q8IXM7 274 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 ZNF251Q9BRH9 671 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 SIRT7Q9NRC8 400 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 RALYQ9UKM9 306 aaKnown RBP13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 RBMXL2O75526 392 aaKnown RBP13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 OR2C1O95371 312 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 OR13C7P0DN81 318 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 ERVFRD-1P60508 538 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 UBE2KP61086 200 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 ERVK-16P61578 105 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 TNFRSF9Q07011 255 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 KHDC3LQ587J8 217 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 SP5Q6BEB4 398 aaPredicted RBP13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 OR4S2Q8NH73 311 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 RAB1CQ92928 201 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 TIMD4Q96H15 378 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 PSENENQ9NZ42 101 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 HSPB7Q9UBY9 170 aa13.3□□□□□ -0.28
SNRNP35-204ENST00000527158 HIVEP3Q5T1R4 2406 aa13.29□□□□□ -0.28
SNRNP35-204ENST00000527158 GPR37O15354 613 aa13.29□□□□□ -0.28
SNRNP35-204ENST00000527158 CST7O76096 145 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms