RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 C5orf30Q96GV9 206 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 GFI1Q99684 422 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 MGLLQ99685 303 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 ZC4H2Q9NQZ6 224 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 TECRQ9NZ01 308 aaKnown RBP12.12□□□□□ -0.47
PTPRU-210ENST00000527027 LSM2Q9Y333 95 aaKnown RBP12.12□□□□□ -0.47
PTPRU-210ENST00000527027 TRBV6-7A0A0A0MS04 114 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 C2orf70A6NJV1 201 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 HSMCR30P0CW71 290 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 MRPS15P82914 257 aaKnown RBP12.11□□□□□ -0.47
PTPRU-210ENST00000527027 RAB11BQ15907 218 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 FAM209BQ5JX69 171 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 IDO2Q6ZQW0 420 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 TTC9CQ8N5M4 171 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 NECAP1Q8NC96 275 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 ADTRPQ96IZ2 230 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 SPIN2AQ99865 258 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 SPIN2BQ9BPZ2 258 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 KRTAP17-1Q9BYP8 105 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 AK6Q9Y3D8 172 aaKnown RBP12.11□□□□□ -0.47
PTPRU-210ENST00000527027 RBM7Q9Y580 266 aaKnown RBP12.11□□□□□ -0.47
PTPRU-210ENST00000527027 DMRT1Q9Y5R6 373 aa12.11□□□□□ -0.47
PTPRU-210ENST00000527027 ACTL6BO94805 426 aa12.1□□□□□ -0.47
PTPRU-210ENST00000527027 DIRAS3O95661 229 aa12.1□□□□□ -0.47
PTPRU-210ENST00000527027 CRYZL1O95825 349 aa12.1□□□□□ -0.47
PTPRU-210ENST00000527027 GSTT2P0CG29 244 aa12.1□□□□□ -0.47
PTPRU-210ENST00000527027 GSTT2BP0CG30 244 aa12.1□□□□□ -0.47
PTPRU-210ENST00000527027 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
PTPRU-210ENST00000527027 MAP2K4P45985 399 aa12.1□□□□□ -0.47
PTPRU-210ENST00000527027 C2orf76Q3KRA6 126 aa12.1□□□□□ -0.47
PTPRU-210ENST00000527027 DDB2Q92466 427 aa12.1□□□□□ -0.47
PTPRU-210ENST00000527027 WDR89Q96FK6 387 aaPredicted RBP12.1□□□□□ -0.47
PTPRU-210ENST00000527027 PPP5D1E7EU14 171 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 LGALS9O00182 355 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 GGCTO75223 188 aaKnown RBP12.09□□□□□ -0.47
PTPRU-210ENST00000527027 OR2J3O76001 311 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 OR2C1O95371 312 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 HLA-AP01891 365 aaKnown RBP12.09□□□□□ -0.47
PTPRU-210ENST00000527027 EDN2P20800 178 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 PSMB9P28065 219 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 CLDN12P56749 244 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 NEDD8Q15843 81 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 C15orf32Q32M92 178 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 TMEM91Q6ZNR0 172 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 OSR1Q8TAX0 266 aaPredicted RBP12.09□□□□□ -0.47
PTPRU-210ENST00000527027 TMEM203Q969S6 136 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 FAM3DQ96BQ1 224 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
PTPRU-210ENST00000527027 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
PTPRU-210ENST00000527027 LINC00473A8K010 186 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 CREBL2O60519 120 aaPredicted RBP12.08□□□□□ -0.48
PTPRU-210ENST00000527027 LY6G6CO95867 125 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 FCGR3AP08637 254 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 CBLN1P23435 193 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 RANBP1P43487 201 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 CDK10Q15131 360 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 TIMM50Q3ZCQ8 353 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 LIPKQ5VXJ0 399 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 SLC25A42Q86VD7 318 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 GPHB5Q86YW7 130 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 GINS4Q9BRT9 223 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 ST6GALNAC5Q9BVH7 336 aa12.08□□□□□ -0.48
PTPRU-210ENST00000527027 ARL6IP5O75915 188 aa12.07□□□□□ -0.48
PTPRU-210ENST00000527027 SAA1P0DJI8 122 aaPredicted RBP12.07□□□□□ -0.48
PTPRU-210ENST00000527027 GALP22466 123 aa12.07□□□□□ -0.48
PTPRU-210ENST00000527027 MMD2Q8IY49 270 aa12.07□□□□□ -0.48
PTPRU-210ENST00000527027 RAB3CQ96E17 227 aa12.07□□□□□ -0.48
PTPRU-210ENST00000527027 CENPOQ9BU64 300 aa12.07□□□□□ -0.48
PTPRU-210ENST00000527027 GGTLC1Q9BX51 225 aa12.07□□□□□ -0.48
PTPRU-210ENST00000527027 RAB22AQ9UL26 194 aa12.07□□□□□ -0.48
PTPRU-210ENST00000527027 FRAS1Q86XX4 4008 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 LOC102724200A0A096LPH7 203 aaPredicted RBP12.06□□□□□ -0.48
PTPRU-210ENST00000527027 TMEM272A0A1B0GTI8 110 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 CXorf65A6NEN9 183 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 SMIM18P0DKX4 95 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 RPL5P46777 297 aaKnown RBP12.06□□□□□ -0.48
PTPRU-210ENST00000527027 PLA2G7Q13093 441 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 C10orf55Q5SWW7 151 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 ZNF57Q68EA5 555 aaPredicted RBP12.06□□□□□ -0.48
PTPRU-210ENST00000527027 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 OR52B4Q8NGK2 314 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 CACNG8Q8WXS5 425 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 MAFIPQ8WZ33 124 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 DCUN1D5Q9BTE7 237 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 NDUFB11Q9NX14 153 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 FBXL7Q9UJT9 491 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 ZNF257Q9Y2Q1 563 aa12.06□□□□□ -0.48
PTPRU-210ENST00000527027 PSMD7P51665 324 aa12.05□□□□□ -0.48
PTPRU-210ENST00000527027 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
PTPRU-210ENST00000527027 FAM106AQ4KMX7 169 aa12.05□□□□□ -0.48
PTPRU-210ENST00000527027 H1FOOQ8IZA3 346 aaPredicted RBP12.05□□□□□ -0.48
PTPRU-210ENST00000527027 SELENOKQ9Y6D0 94 aa12.05□□□□□ -0.48
PTPRU-210ENST00000527027 V9GY05 133 aa12.05□□□□□ -0.48
PTPRU-210ENST00000527027 TMEM213A2RRL7 107 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 HMX3A6NHT5 357 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 NPIPB5A8MRT5 1133 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms