RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 LOC105371242A0A075B767 164 aa11.16□□□□□ -0.62
KDM2A-207ENST00000526258 PPIAL4CA0A0B4J2A2 164 aa11.16□□□□□ -0.62
KDM2A-207ENST00000526258 PPIAL4GP0DN37 164 aa11.16□□□□□ -0.62
KDM2A-207ENST00000526258 PHLDA3Q9Y5J5 127 aa11.16□□□□□ -0.62
KDM2A-207ENST00000526258 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
KDM2A-207ENST00000526258 HOXC4P09017 264 aaPredicted RBP11.16□□□□□ -0.62
KDM2A-207ENST00000526258 CDKN1BP46527 198 aa11.16□□□□□ -0.62
KDM2A-207ENST00000526258 PLPPR1Q8TBJ4 325 aa11.16□□□□□ -0.62
KDM2A-207ENST00000526258 CACNA1DQ01668 2161 aa11.16□□□□□ -0.62
KDM2A-207ENST00000526258 TRBV20OR9-2A0A075B6H5 130 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 TRGV8A0A0C4DH27 118 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 CD5LO43866 347 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 C17orf99Q6UX52 265 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 RTBDNQ9BSG5 229 aaPredicted RBP11.15□□□□□ -0.62
KDM2A-207ENST00000526258 POLR3KQ9Y2Y1 108 aaPredicted RBP11.15□□□□□ -0.62
KDM2A-207ENST00000526258 RPS20P60866 119 aaKnown RBP11.15□□□□□ -0.62
KDM2A-207ENST00000526258 FAM71F2Q6NXP2 309 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 Q6ZNB5 142 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 PRELID3AQ96N28 172 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 IGKV3D-11A0A0A0MRZ8 115 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 LIPT2A6NK58 231 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 IGKV3-11P04433 115 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 REG1BP48304 166 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 SYT8Q8NBV8 401 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 OR52E5Q8NH55 327 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 SIT1Q9Y3P8 196 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 CCDC88CQ9P219 2028 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 TMEM238C9JI98 176 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 NPCDR1Q9BY65 106 aa11.15□□□□□ -0.62
KDM2A-207ENST00000526258 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.63
KDM2A-207ENST00000526258 HS3ST3B1Q9Y662 390 aa11.15□□□□□ -0.63
KDM2A-207ENST00000526258 TDGF1P13385 188 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 OR5AN1Q8NGI8 311 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 OR9G4Q8NGQ1 327 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 GPR82Q96P67 336 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 MC5RP33032 325 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 CX3CL1P78423 397 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 GPR35Q9HC97 309 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 CYTL1Q9NRR1 136 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 MUC21A0A0G2JKD1 596 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 MUC21A0A140T8X8 626 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 HOXA3O43365 443 aaPredicted RBP11.14□□□□□ -0.63
KDM2A-207ENST00000526258 ID1P41134 155 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 MUC21Q5SSG8 566 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 BHLHA15Q7RTS1 189 aaPredicted RBP11.14□□□□□ -0.63
KDM2A-207ENST00000526258 H3BTX0 84 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 ATP5LO75964 103 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 ZNF818PQ6ZRF7 136 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 NFAM1Q8NET5 270 aaPredicted RBP11.14□□□□□ -0.63
KDM2A-207ENST00000526258 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 RNASEH2CQ8TDP1 164 aaKnown RBP11.14□□□□□ -0.63
KDM2A-207ENST00000526258 CACNA1SQ13698 1873 aa11.14□□□□□ -0.63
KDM2A-207ENST00000526258 A0A0U1RQV5 110 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 A0A1B0GW64 132 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 ZNF585BQ52M93 769 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 UBALD2Q8IYN6 164 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 KIR2DL4Q99706 377 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 C1RLQ9NZP8 487 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 AKAP11Q9UKA4 1901 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 TRAV12-3A0A0B4J271 114 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 CXorf51AA0A1B0GTR3 108 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 LRTM2Q8N967 370 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 FER1L6-AS1Q8NA97 138 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 ZNF488Q96MN9 340 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 LOXL2Q9Y4K0 774 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 CD33P20138 364 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 GPBAR1Q8TDU6 330 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 A0A087X0K7 114 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 IGHV2-5P01817 119 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 SPTBP11277 2137 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 SUMO2P61956 95 aaKnown RBP11.13□□□□□ -0.63
KDM2A-207ENST00000526258 ZNF714Q96N38 554 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 NABP2Q9BQ15 211 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 ICE1Q9Y2F5 2266 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 A0A1W2PQD3 144 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 F2RL2O00254 374 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 MYF5P13349 255 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 CSRP3P50461 194 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 UCP2P55851 309 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
KDM2A-207ENST00000526258 LDLRAD1Q5T700 205 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 C16orf92Q96LL3 132 aa11.13□□□□□ -0.63
KDM2A-207ENST00000526258 ADAMTSL5Q6ZMM2 481 aa11.12□□□□□ -0.63
KDM2A-207ENST00000526258 STPG3Q8N7X2 389 aa11.12□□□□□ -0.63
KDM2A-207ENST00000526258 TRAV8-1A0A0A6YYK1 113 aa11.12□□□□□ -0.63
KDM2A-207ENST00000526258 FADS6Q8N9I5 356 aa11.12□□□□□ -0.63
KDM2A-207ENST00000526258 KLF2Q9Y5W3 355 aaPredicted RBP11.12□□□□□ -0.63
KDM2A-207ENST00000526258 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
KDM2A-207ENST00000526258 IGKV3OR2-268A0A0C4DH90 116 aa11.12□□□□□ -0.63
KDM2A-207ENST00000526258 PRTN3P24158 256 aa11.12□□□□□ -0.63
KDM2A-207ENST00000526258 DEFB109BQ30KR1 87 aa11.12□□□□□ -0.63
KDM2A-207ENST00000526258 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms