RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 TAS2R20P59543 309 aa10.36□□□□□ -0.75
USH1C-203ENST00000526181 VBP1P61758 197 aa10.36□□□□□ -0.75
USH1C-203ENST00000526181 C10orf55Q5SWW7 151 aa10.36□□□□□ -0.75
USH1C-203ENST00000526181 SECTM1Q8WVN6 248 aa10.36□□□□□ -0.75
USH1C-203ENST00000526181 ACOT12Q8WYK0 555 aa10.36□□□□□ -0.75
USH1C-203ENST00000526181 SLC25A46Q96AG3 418 aa10.36□□□□□ -0.75
USH1C-203ENST00000526181 S100A16Q96FQ6 103 aaKnown RBP10.36□□□□□ -0.75
USH1C-203ENST00000526181 PHB2Q99623 299 aa10.36□□□□□ -0.75
USH1C-203ENST00000526181 ZNF430Q9H8G1 570 aaPredicted RBP10.36□□□□□ -0.75
USH1C-203ENST00000526181 RBMXL2O75526 392 aaKnown RBP10.35□□□□□ -0.75
USH1C-203ENST00000526181 SLC22A5O76082 557 aa10.35□□□□□ -0.75
USH1C-203ENST00000526181 PPYP01298 95 aa10.35□□□□□ -0.75
USH1C-203ENST00000526181 EIF4EP06730 217 aaKnown RBP10.35□□□□□ -0.75
USH1C-203ENST00000526181 FXYD4P59646 89 aa10.35□□□□□ -0.75
USH1C-203ENST00000526181 CDK10Q15131 360 aa10.35□□□□□ -0.75
USH1C-203ENST00000526181 TMEM69Q5SWH9 247 aa10.35□□□□□ -0.75
USH1C-203ENST00000526181 MFSD4AQ8N468 514 aa10.35□□□□□ -0.75
USH1C-203ENST00000526181 SRSF12Q8WXF0 261 aaKnown RBP10.35□□□□□ -0.75
USH1C-203ENST00000526181 HSD17B10Q99714 261 aaKnown RBP10.35□□□□□ -0.75
USH1C-203ENST00000526181 NAA50Q9GZZ1 169 aaKnown RBP10.35□□□□□ -0.75
USH1C-203ENST00000526181 COA4Q9NYJ1 87 aa10.35□□□□□ -0.75
USH1C-203ENST00000526181 MRPS7Q9Y2R9 242 aaKnown RBP10.35□□□□□ -0.75
USH1C-203ENST00000526181 PRELID3BQ9Y3B1 194 aa10.35□□□□□ -0.75
USH1C-203ENST00000526181 ANKRD34BA5PLL1 514 aa10.34□□□□□ -0.75
USH1C-203ENST00000526181 H3BUA1 57 aa10.34□□□□□ -0.75
USH1C-203ENST00000526181 RAMP3O60896 148 aa10.34□□□□□ -0.75
USH1C-203ENST00000526181 HSPB1P04792 205 aaKnown RBP10.34□□□□□ -0.75
USH1C-203ENST00000526181 CBX5P45973 191 aa10.34□□□□□ -0.75
USH1C-203ENST00000526181 OR5AP2Q8NGF4 316 aa10.34□□□□□ -0.75
USH1C-203ENST00000526181 OR4S2Q8NH73 311 aa10.34□□□□□ -0.75
USH1C-203ENST00000526181 TINAGL1Q9GZM7 467 aaPredicted RBP10.34□□□□□ -0.75
USH1C-203ENST00000526181 IFT46Q9NQC8 304 aa10.34□□□□□ -0.75
USH1C-203ENST00000526181 COMMD3Q9UBI1 195 aa10.34□□□□□ -0.75
USH1C-203ENST00000526181 C13orf42A0A1B0GVH6 325 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 SAP30O75446 220 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 PRH1P02810 166 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 DYRK1AQ13627 763 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 C11orf87Q6NUJ2 197 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 ZNF66Q6ZN08 573 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 ZNF818PQ6ZRF7 136 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 TMEM17Q86X19 198 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 ADAD2Q8NCV1 583 aaKnown RBP10.33□□□□□ -0.76
USH1C-203ENST00000526181 TMEM68Q96MH6 324 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 SLC5A7Q9GZV3 580 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 ANAPC10Q9UM13 185 aa10.33□□□□□ -0.76
USH1C-203ENST00000526181 SULT1C2O00338 296 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 MPPED1O15442 326 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 KBTBD11O94819 623 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 TRBV12-3P01733 135 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 PMP2P02689 132 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 OR9G9P0C7N8 305 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 MYOD1P15172 320 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 RFX2P48378 723 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 ZNF45Q02386 682 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 MSMO1Q15800 293 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 ACSM6Q6P461 480 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 C19orf35Q6ZS72 473 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 SSX9Q7RTT3 188 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 HAPLN4Q86UW8 402 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 MMD2Q8IY49 270 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 PUSL1Q8N0Z8 303 aaKnown RBP10.32□□□□□ -0.76
USH1C-203ENST00000526181 GIMAP1Q8WWP7 306 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 KCTD12Q96CX2 325 aaKnown RBP10.32□□□□□ -0.76
USH1C-203ENST00000526181 EHFQ9NZC4 300 aa10.32□□□□□ -0.76
USH1C-203ENST00000526181 ZMAT5Q9UDW3 170 aaKnown RBP10.32□□□□□ -0.76
USH1C-203ENST00000526181 ZNF256Q9Y2P7 627 aaPredicted RBP10.32□□□□□ -0.76
USH1C-203ENST00000526181 LSM4Q9Y4Z0 139 aaKnown RBP10.32□□□□□ -0.76
USH1C-203ENST00000526181 A0A0G2JLM5 398 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 A0A1B0GW64 132 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 HMX3A6NHT5 357 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 TEX22C9J3V5 150 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 E7EUB6 86 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 CREBL2O60519 120 aaPredicted RBP10.31□□□□□ -0.76
USH1C-203ENST00000526181 HPGDSO60760 199 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 ACTL6BO94805 426 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 OR2A4O95047 310 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 GABARAPO95166 117 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 BRI3O95415 125 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 LY86O95711 162 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 INSL3P51460 131 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 CD69Q07108 199 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 CTF1Q16619 201 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 ZNF429Q86V71 674 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 LYSMD2Q8IV50 215 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 SPAG16Q8N0X2 631 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 TMEM167AQ8TBQ9 72 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 OR2A7Q96R45 310 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 B9D2Q9BPU9 175 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 ZNF2Q9BSG1 426 aaPredicted RBP10.31□□□□□ -0.76
USH1C-203ENST00000526181 ADAM30Q9UKF2 790 aa10.31□□□□□ -0.76
USH1C-203ENST00000526181 IL6RP08887 468 aaPredicted RBP10.3□□□□□ -0.76
USH1C-203ENST00000526181 SPNP16150 400 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 NAT1P18440 290 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 ELK1P19419 428 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 PRSS3P35030 304 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 HERV-K104P61576 105 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 GPR107Q5VW38 600 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 ZNF343Q6P1L6 599 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 SNX29P2Q8IUI4 249 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 ZBTB34Q8NCN2 500 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms