RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 K7EM74 188 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 CXCL1P09341 107 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 IRF2P14316 349 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 THBS3P49746 956 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 RND2P52198 227 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 RELBQ01201 579 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 KIAA0141Q14154 515 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 C1orf87Q8N0U7 546 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 RAB24Q969Q5 203 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 SMIM7Q9BQ49 75 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
CCDC90B-203ENST00000525503 EP300Q09472 2414 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 CHD3Q12873 2000 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 MKRN2OSH3BPM6 223 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 SLC31A2O15432 143 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 KBTBD11O94819 623 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 IGHV3-7P01780 117 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 BMP5P22003 454 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 VDAC2P45880 294 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 TMEM241Q24JQ0 296 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 CT45A1Q5HYN5 189 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 FAM201AQ5SY85 155 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 CYP2G1PQ6ZSU1 146 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 CT45A3Q8NHU0 189 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 GAFA1Q96PS6 74 aa13.63□□□□□ -0.23
CCDC90B-203ENST00000525503 TGIF2-C20orf24A0A0A6YYL0 155 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 HMGB3O15347 200 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 TGOLN2O43493 480 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 SELLP14151 372 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 CDC34P49427 236 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 S100A12P80511 92 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 TLE1Q04724 770 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 TMEM108Q6UXF1 575 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 OR13D1Q8NGV5 346 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 TMPRSS5Q9H3S3 457 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 ZNF318Q5VUA4 2279 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 TRGV8A0A0C4DH27 118 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 ZNF729A6NN14 1252 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 SEC14L6B5MCN3 397 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 OPN1MWP04001 364 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 OPN1MW2P0DN77 364 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 OPN1MW3P0DN78 364 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 TMPRSS3P57727 454 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 VKORC1L1Q8N0U8 176 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 PRSS33Q8NF86 280 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 LINC00574Q9H8X3 128 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 ELOVL5Q9NYP7 299 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 IDI2-AS1Q9NZ38 188 aa13.62□□□□□ -0.23
CCDC90B-203ENST00000525503 SAA2-SAA4A0A096LPE2 208 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 SMCO3A2RU48 225 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 PRRG2O14669 202 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 SAA2P0DJI9 122 aaPredicted RBP13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 MRPS11P82912 194 aaKnown RBP13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 TMEM249Q2WGJ8 235 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 ZNF788Q6ZQV5 615 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 CORO2AQ92828 525 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 LEAP2Q969E1 77 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 FAM210BQ96KR6 192 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 TCF19Q9Y242 345 aa13.61□□□□□ -0.23
CCDC90B-203ENST00000525503 C15orf61A6NNL5 157 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 GFRA3O60609 400 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 OPRK1P41145 380 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 ZNF439Q8NDP4 499 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 DEFB108BQ8NET1 73 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 OR4F5Q8NH21 305 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 OR4F4Q96R69 305 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 CCL13Q99616 98 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 FOXA2Q9Y261 457 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 DSPP15924 2871 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 PRR14LQ5THK1 2151 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 CFAP47Q6ZTR5 3102 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 TRAV3A0A0B4J244 114 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 C16orf97H3BN30 126 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 GYPAP02724 150 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 ADIRFQ15847 76 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 TEX36Q5VZQ5 186 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 LYG1Q8N1E2 194 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 Q8N7P7 452 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 RAB1CQ92928 201 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 RPUSD4Q96CM3 377 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 KCNIP2Q9NS61 270 aa13.6□□□□□ -0.23
CCDC90B-203ENST00000525503 USF3Q68DE3 2245 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 A0A1W2PPV4 95 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 NKX6-3A6NJ46 265 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 RRHO14718 337 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 HRASP01112 189 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 TNFRSF1AP19438 455 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 HOXA5P20719 270 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 DUX4L9Q6RFH8 374 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 C1orf229Q6ZS94 237 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 C22orf34Q6ZV56 151 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 DOLPP1Q86YN1 238 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 NEIL1Q96FI4 390 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 RHOVQ96L33 236 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 HEATR1Q9H583 2144 aaKnown RBP13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 ENY2Q9NPA8 101 aa13.59□□□□□ -0.23
CCDC90B-203ENST00000525503 TRBV24-1A0A075B6N3 115 aa13.58□□□□□ -0.23
CCDC90B-203ENST00000525503 A0A0G2JNJ9 132 aa13.58□□□□□ -0.23
CCDC90B-203ENST00000525503 PRSS46E5RG02 174 aa13.58□□□□□ -0.23
CCDC90B-203ENST00000525503 PAGE4O60829 102 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms