RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZNF684Q5T5D7 378 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SAMD13Q5VXD3 122 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 THOC7Q6I9Y2 204 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 LAMTOR1Q6IAA8 161 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 Q6ZRN7 208 aaPredicted RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 Q6ZRU5 148 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZNF621Q6ZSS3 439 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZCCHC23Q6ZST2 131 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZNF826PQ6ZT77 177 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZNF833PQ6ZTB9 187 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 TRPM8Q7Z2W7 1104 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 HSD17B13Q7Z5P4 300 aaPredicted RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 DEFB125Q8N687 156 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 KRTCAP2Q8N6L1 136 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 C10orf53Q8N6V4 93 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZNF645Q8N7E2 425 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 NECAP1Q8NC96 275 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 PXT1Q8NFP0 134 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 OR8J3Q8NGG0 315 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 OR1L6Q8NGR2 347 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 OR10X1Q8NGY0 326 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 OR52J3Q8NH60 311 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZNRF2Q8NHG8 242 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 DYNLRB2Q8TF09 96 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 AENQ8WTP8 325 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 ASB17Q8WXJ9 295 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SGK3Q96BR1 496 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 RNF170Q96K19 258 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 CEP19Q96LK0 163 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 OR52E6Q96RD3 313 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 MYCBPQ99417 103 aaPredicted RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 RARRES2Q99969 163 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 HSPB9Q9BQS6 159 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SIKE1Q9BRV8 207 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 NMNAT2Q9BZQ4 307 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 KAT8Q9H7Z6 458 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 PLEKHA3Q9HB20 300 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZNF286AQ9HBT8 521 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 IL36GQ9NZH8 169 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 CNOT2Q9NZN8 540 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 CRCT1Q9UGL9 99 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 JPT1Q9UK76 154 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 TFR2Q9UP52 801 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 UFC1Q9Y3C8 167 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 RHBDD3Q9Y3P4 386 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SAR1BQ9Y6B6 198 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 TMEM14AQ9Y6G1 99 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 DSCAML1Q8TD84 2053 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 IGHV3OR15-7A0A075B7D8 119 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 DEFB131BA0A096LNP1 70 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TRBV7-1A0A0A6YYK4 115 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TRAV39A0A0B4J263 110 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 IGHV3-35A0A0C4DH35 117 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 DHRS12A0PJE2 317 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TMEM213A2RRL7 107 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 NCBP2LA6PVI3 153 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 LYRM9A8MSI8 78 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 EFCAB9A8MZ26 197 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF732B4DXR9 585 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 IGLL5B9A064 214 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 LRRN3E7EW58 273 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SLC33A1O00400 549 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 COPEO14579 308 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SH2D1BO14796 132 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF861PO60384 105 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 YPEL1O60688 119 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 PRAF2O60831 178 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF780AO75290 641 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 ENTPD6O75354 484 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SC5DO75845 299 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 DHFRP00374 187 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 IFNA5P01569 189 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 IGLV2-8P01709 118 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CRYGCP07315 174 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CD7P09564 240 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 LINC00032P0C843 101 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CTRB1P17538 263 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SRMP19623 302 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 PRKACBP22694 351 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CBLN1P23435 193 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CRHBPP24387 322 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 HLA-DMBP28068 263 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 GCAP28676 217 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 HSD11B1P28845 292 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 BLVRBP30043 206 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 HTR1FP30939 366 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 FMO3P31513 532 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CDKN2CP42773 168 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 HAAOP46952 286 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 GABRA2P47869 451 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SLC1A6P48664 564 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CX3CR1P49238 355 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 RPL14P50914 215 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 GPM6AP51674 278 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ATP1B3P54709 279 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 PLTPP55058 493 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CCL18P55774 89 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 DLX1P56177 255 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 MTCP1P56278 107 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms