RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TRAV3A0A0B4J244 114 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 KITLGP21583 273 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 TCL1AP56279 114 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 ZNF90Q03938 601 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 PSG7Q13046 419 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 IL11RAQ14626 422 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 TMEM105Q8N8V8 129 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 PCSK5Q92824 1860 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 TRAV34A0A0B4J273 112 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 HBZP02008 142 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 OR10J1P30954 320 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 SOX8P57073 446 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 EDDM3AQ14507 147 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 KRTCAP3Q53RY4 240 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 UTF1Q5T230 341 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 TIPARPQ7Z3E1 657 aaKnown RBP10.99□□□□□ -0.65
CAPN1-202ENST00000524773 TMEM144Q7Z5S9 345 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 C1orf210Q8IVY1 113 aa10.99□□□□□ -0.65
CAPN1-202ENST00000524773 YTHDF2Q9Y5A9 579 aaKnown RBP10.99□□□□□ -0.65
CAPN1-202ENST00000524773 KIR2DL5BA0A0G2JN68 375 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 KIR2DL5BA0A0G2JPC4 375 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 MDFIC2A0A1B0GVS7 189 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 C15orf62A8K5M9 175 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 K7EN84 100 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 SH2D1BO14796 132 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 ACTL6BO94805 426 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 RAC2P15153 192 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 CLDN18P56856 261 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 KRTDAPP60985 99 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 DMRTA1Q5VZB9 504 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 ALKBH2Q6NS38 261 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 ATOH7Q8N100 152 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 KIR2DL5AQ8N109 375 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 RP1L1Q8IWN7 2480 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-202ENST00000524773 TMEM210A6NLX4 147 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 J3QT63 122 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 NEURL1O76050 574 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 TYMSP04818 313 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 MYOD1P15172 320 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 ARSJQ5FYB0 599 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-202ENST00000524773 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 STRADBQ9C0K7 418 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 TMEM106BQ9NUM4 274 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 GOLT1BQ9Y3E0 138 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 KALRNO60229 2985 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 TRBV6-6A0A0A6YYG2 114 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 A0A1B0GWJ7 208 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 CD1BP29016 333 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 TIMP3P35625 211 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 FXYD3Q14802 87 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 TPTE2P1Q5T6R2 138 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 ZNF645Q8N7E2 425 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 GALMQ96C23 342 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 RBM14Q96PK6 669 aaKnown RBP10.98□□□□□ -0.65
CAPN1-202ENST00000524773 SAMD10Q9BYL1 202 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 MRPL18Q9H0U6 180 aaKnown RBP10.98□□□□□ -0.65
CAPN1-202ENST00000524773 LOXL2Q9Y4K0 774 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 TIMM9Q9Y5J7 89 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 DMXL1Q9Y485 3027 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 CADP27708 2225 aa10.98□□□□□ -0.65
CAPN1-202ENST00000524773 HAND1O96004 215 aa10.97□□□□□ -0.65
CAPN1-202ENST00000524773 PRAMEF6Q5VXH4 476 aa10.97□□□□□ -0.65
CAPN1-202ENST00000524773 LEAP2Q969E1 77 aa10.97□□□□□ -0.65
CAPN1-202ENST00000524773 SEPSECSQ9HD40 501 aaKnown RBP10.97□□□□□ -0.65
CAPN1-202ENST00000524773 TNRC6BQ9UPQ9 1833 aaKnown RBP10.97□□□□□ -0.65
CAPN1-202ENST00000524773 CSMD1Q96PZ7 3565 aa10.97□□□□□ -0.65
CAPN1-202ENST00000524773 MARCH11A6NNE9 402 aa10.97□□□□□ -0.65
CAPN1-202ENST00000524773 FCGR3BO75015 233 aa10.97□□□□□ -0.65
CAPN1-202ENST00000524773 MSMO1Q15800 293 aa10.97□□□□□ -0.65
CAPN1-202ENST00000524773 ATMQ13315 3056 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 FCN1O00602 326 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 DLEU1O43261 78 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 SS18L1O75177 396 aaPredicted RBP10.96□□□□□ -0.65
CAPN1-202ENST00000524773 RPLP1P05386 114 aaKnown RBP10.96□□□□□ -0.65
CAPN1-202ENST00000524773 CRISP2P16562 243 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 GCNT2Q8N0V5 402 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 OR13A1Q8NGR1 328 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 MS4A5Q9H3V2 200 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 LPAR2Q9HBW0 351 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 TNRC6AQ8NDV7 1962 aaKnown RBP10.96□□□□□ -0.65
CAPN1-202ENST00000524773 HCFC1P51610 2035 aa10.96□□□□□ -0.65
CAPN1-202ENST00000524773 OR5B21A6NL26 309 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 AHRRA9YTQ3 701 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 TRA2AQ13595 282 aaKnown RBP eCLIP10.96□□□□□ -0.66
CAPN1-202ENST00000524773 MMDQ15546 238 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 NRN1LQ496H8 165 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 ACSF3Q4G176 576 aaPredicted RBP10.96□□□□□ -0.66
CAPN1-202ENST00000524773 OR2M7Q8NG81 312 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 OR10G8Q8NGN5 311 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 OR1L6Q8NGR2 347 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 DEFB127Q9H1M4 99 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 OBP2BQ9NPH6 170 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 KCNIP1Q9NZI2 227 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 FBXL7Q9UJT9 491 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 MPC1Q9Y5U8 109 aa10.96□□□□□ -0.66
CAPN1-202ENST00000524773 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 LYZL6O75951 148 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 VENTXO95231 258 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 P0C879 139 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms