RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 FCGR3AP08637 254 aa19.45■□□□□ 0.7
PVT1-219ENST00000523427 DUTP33316 252 aaKnown RBP19.45■□□□□ 0.7
PVT1-219ENST00000523427 TPBGQ13641 420 aa19.45■□□□□ 0.7
PVT1-219ENST00000523427 OR52B4Q8NGK2 314 aa19.45■□□□□ 0.7
PVT1-219ENST00000523427 OVOL2Q9BRP0 275 aa19.45■□□□□ 0.7
PVT1-219ENST00000523427 CABLES2Q9BTV7 478 aa19.45■□□□□ 0.7
PVT1-219ENST00000523427 ZC4H2Q9NQZ6 224 aa19.45■□□□□ 0.7
PVT1-219ENST00000523427 TECRQ9NZ01 308 aaKnown RBP19.45■□□□□ 0.7
PVT1-219ENST00000523427 KCNK7Q9Y2U2 307 aa19.45■□□□□ 0.7
PVT1-219ENST00000523427 SCAF4O95104 1147 aaKnown RBP19.44■□□□□ 0.7
PVT1-219ENST00000523427 SAA1P0DJI8 122 aaPredicted RBP19.44■□□□□ 0.7
PVT1-219ENST00000523427 OR2B11Q5JQS5 317 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 TMEM61Q8N0U2 210 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 TTC9CQ8N5M4 171 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 PACRGLQ8N7B6 248 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 DDB2Q92466 427 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 UFD1Q92890 307 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 RAB3CQ96E17 227 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 ADTRPQ96IZ2 230 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 GGTLC1Q9BX51 225 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 FBXL7Q9UJT9 491 aa19.44■□□□□ 0.7
PVT1-219ENST00000523427 CBLN1P23435 193 aa19.43■□□□□ 0.7
PVT1-219ENST00000523427 HES5Q5TA89 166 aa19.43■□□□□ 0.7
PVT1-219ENST00000523427 TMEM91Q6ZNR0 172 aa19.43■□□□□ 0.7
PVT1-219ENST00000523427 OSR1Q8TAX0 266 aaPredicted RBP19.43■□□□□ 0.7
PVT1-219ENST00000523427 DMRT1Q9Y5R6 373 aa19.43■□□□□ 0.7
PVT1-219ENST00000523427 TMEM272A0A1B0GTI8 110 aa19.42■□□□□ 0.7
PVT1-219ENST00000523427 FCGR3BO75015 233 aa19.42■□□□□ 0.7
PVT1-219ENST00000523427 HSMCR30P0CW71 290 aa19.42■□□□□ 0.7
PVT1-219ENST00000523427 GNB3P16520 340 aa19.42■□□□□ 0.7
PVT1-219ENST00000523427 RPS25P62851 125 aaKnown RBP19.42■□□□□ 0.7
PVT1-219ENST00000523427 CDK10Q15131 360 aa19.42■□□□□ 0.7
PVT1-219ENST00000523427 ZNF57Q68EA5 555 aaPredicted RBP19.42■□□□□ 0.7
PVT1-219ENST00000523427 CLEC19AQ6UXS0 136 aa19.42■□□□□ 0.7
PVT1-219ENST00000523427 MMD2Q8IY49 270 aa19.42■□□□□ 0.7
PVT1-219ENST00000523427 FBLIM1Q8WUP2 373 aa19.42■□□□□ 0.7
PVT1-219ENST00000523427 LSM2Q9Y333 95 aaKnown RBP19.42■□□□□ 0.7
PVT1-219ENST00000523427 LOC102724200A0A096LPH7 203 aaPredicted RBP19.41■□□□□ 0.7
PVT1-219ENST00000523427 DPPA5A6NC42 116 aa19.41■□□□□ 0.7
PVT1-219ENST00000523427 CREBL2O60519 120 aaPredicted RBP19.41■□□□□ 0.7
PVT1-219ENST00000523427 VKORC1L1Q8N0U8 176 aa19.41■□□□□ 0.7
PVT1-219ENST00000523427 FYTTD1Q96QD9 318 aaKnown RBP19.41■□□□□ 0.7
PVT1-219ENST00000523427 C8orf4Q9NR00 106 aa19.41■□□□□ 0.7
PVT1-219ENST00000523427 A0A0J9YWU9 116 aa19.4■□□□□ 0.7
PVT1-219ENST00000523427 NDUFB8O95169 186 aa19.4■□□□□ 0.7
PVT1-219ENST00000523427 CALRP27797 417 aaKnown RBP19.4■□□□□ 0.7
PVT1-219ENST00000523427 ARL3P36405 182 aa19.4■□□□□ 0.7
PVT1-219ENST00000523427 EWSR1Q01844 656 aaKnown RBP eCLIP19.4■□□□□ 0.7
PVT1-219ENST00000523427 SLC25A42Q86VD7 318 aa19.4■□□□□ 0.7
PVT1-219ENST00000523427 UXS1Q8NBZ7 420 aa19.4■□□□□ 0.7
PVT1-219ENST00000523427 MLXQ9UH92 298 aa19.4■□□□□ 0.7
PVT1-219ENST00000523427 LGALS9O00182 355 aa19.39■□□□□ 0.69
PVT1-219ENST00000523427 ARL6IP5O75915 188 aa19.39■□□□□ 0.69
PVT1-219ENST00000523427 ARFRP1Q13795 201 aa19.39■□□□□ 0.69
PVT1-219ENST00000523427 RAB22AQ9UL26 194 aa19.39■□□□□ 0.69
PVT1-219ENST00000523427 ZNF257Q9Y2Q1 563 aa19.39■□□□□ 0.69
PVT1-219ENST00000523427 TMEM213A2RRL7 107 aa19.38■□□□□ 0.69
PVT1-219ENST00000523427 TALDO1P37837 337 aa19.38■□□□□ 0.69
PVT1-219ENST00000523427 TM4SF20Q53R12 229 aa19.38■□□□□ 0.69
PVT1-219ENST00000523427 GPHB5Q86YW7 130 aa19.38■□□□□ 0.69
PVT1-219ENST00000523427 H1FOOQ8IZA3 346 aaPredicted RBP19.38■□□□□ 0.69
PVT1-219ENST00000523427 V9GY05 133 aa19.38■□□□□ 0.69
PVT1-219ENST00000523427 IGKV1D-8A0A087WSZ0 117 aa19.37■□□□□ 0.69
PVT1-219ENST00000523427 FAM106AQ4KMX7 169 aa19.37■□□□□ 0.69
PVT1-219ENST00000523427 FAM209BQ5JX69 171 aa19.37■□□□□ 0.69
PVT1-219ENST00000523427 BTNL8Q6UX41 500 aa19.37■□□□□ 0.69
PVT1-219ENST00000523427 KCTD9Q7L273 389 aa19.37■□□□□ 0.69
PVT1-219ENST00000523427 OR10R2Q8NGX6 335 aa19.37■□□□□ 0.69
PVT1-219ENST00000523427 CCDC140Q96MF4 163 aa19.37■□□□□ 0.69
PVT1-219ENST00000523427 OR51E2Q9H255 320 aa19.37■□□□□ 0.69
PVT1-219ENST00000523427 NUPR2A6NF83 97 aa19.36■□□□□ 0.69
PVT1-219ENST00000523427 TEX22C9J3V5 150 aa19.36■□□□□ 0.69
PVT1-219ENST00000523427 RAB27BO00194 218 aa19.36■□□□□ 0.69
PVT1-219ENST00000523427 GADD45AP24522 165 aa19.36■□□□□ 0.69
PVT1-219ENST00000523427 RCN1Q15293 331 aa19.36■□□□□ 0.69
PVT1-219ENST00000523427 RPP25LQ8N5L8 163 aaKnown RBP19.36■□□□□ 0.69
PVT1-219ENST00000523427 E7EUB6 86 aa19.35■□□□□ 0.69
PVT1-219ENST00000523427 IL6RP08887 468 aaPredicted RBP19.35■□□□□ 0.69
PVT1-219ENST00000523427 RPL27AP46776 148 aaKnown RBP19.35■□□□□ 0.69
PVT1-219ENST00000523427 RPL30P62888 115 aaKnown RBP19.35■□□□□ 0.69
PVT1-219ENST00000523427 ANKRD55Q3KP44 614 aa19.35■□□□□ 0.69
PVT1-219ENST00000523427 LYG2Q86SG7 212 aa19.35■□□□□ 0.69
PVT1-219ENST00000523427 SCN3BQ9NY72 215 aa19.35■□□□□ 0.69
PVT1-219ENST00000523427 PRELID3BQ9Y3B1 194 aa19.35■□□□□ 0.69
PVT1-219ENST00000523427 FRAS1Q86XX4 4008 aa19.35■□□□□ 0.69
PVT1-219ENST00000523427 MFNGO00587 321 aa19.34■□□□□ 0.69
PVT1-219ENST00000523427 DIRAS3O95661 229 aa19.34■□□□□ 0.69
PVT1-219ENST00000523427 AREGP15514 252 aa19.34■□□□□ 0.69
PVT1-219ENST00000523427 HIST1H1DP16402 221 aaKnown RBP19.34■□□□□ 0.69
PVT1-219ENST00000523427 CEMP1Q6PRD7 247 aaPredicted RBP19.34■□□□□ 0.69
PVT1-219ENST00000523427 EEF1AKMT3Q96AZ1 226 aa19.34■□□□□ 0.69
PVT1-219ENST00000523427 FANCD2OSQ96PS1 177 aa19.34■□□□□ 0.69
PVT1-219ENST00000523427 MRPS7Q9Y2R9 242 aaKnown RBP19.34■□□□□ 0.69
PVT1-219ENST00000523427 IGHV3-35A0A0C4DH35 117 aa19.33■□□□□ 0.68
PVT1-219ENST00000523427 REG1AP05451 166 aa19.33■□□□□ 0.68
PVT1-219ENST00000523427 NFYAP23511 347 aaPredicted RBP19.33■□□□□ 0.68
PVT1-219ENST00000523427 CRHBPP24387 322 aa19.33■□□□□ 0.68
PVT1-219ENST00000523427 FABP5Q01469 135 aa19.33■□□□□ 0.68
PVT1-219ENST00000523427 DEFB135Q30KP9 77 aa19.33■□□□□ 0.68
PVT1-219ENST00000523427 RBPMS2Q6ZRY4 209 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms