RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 OR56B1Q8NGI3 324 aa16.99■□□□□ 0.31
PVT1-218ENST00000523328 ADTRPQ96IZ2 230 aa16.99■□□□□ 0.31
PVT1-218ENST00000523328 LSM2Q9Y333 95 aaKnown RBP16.99■□□□□ 0.31
PVT1-218ENST00000523328 LOC102724200A0A096LPH7 203 aaPredicted RBP16.98■□□□□ 0.31
PVT1-218ENST00000523328 CLDN12P56749 244 aa16.98■□□□□ 0.31
PVT1-218ENST00000523328 CDK10Q15131 360 aa16.98■□□□□ 0.31
PVT1-218ENST00000523328 MND1Q9BWT6 205 aa16.98■□□□□ 0.31
PVT1-218ENST00000523328 MLXQ9UH92 298 aa16.98■□□□□ 0.31
PVT1-218ENST00000523328 AK6Q9Y3D8 172 aaKnown RBP16.98■□□□□ 0.31
PVT1-218ENST00000523328 A0A0J9YWU9 116 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 TMEM213A2RRL7 107 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 ACTL6BO94805 426 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 CDK1P06493 297 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 PLA2G7Q13093 441 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 RAB11BQ15907 218 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 ZNF57Q68EA5 555 aaPredicted RBP16.97■□□□□ 0.31
PVT1-218ENST00000523328 C19orf35Q6ZS72 473 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 WFDC3Q8IUB2 231 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 MMD2Q8IY49 270 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 PACRGLQ8N7B6 248 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 OR52B4Q8NGK2 314 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 CCDC140Q96MF4 163 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 ZNF257Q9Y2Q1 563 aa16.97■□□□□ 0.31
PVT1-218ENST00000523328 RBM7Q9Y580 266 aaKnown RBP16.97■□□□□ 0.31
PVT1-218ENST00000523328 HMX3A6NHT5 357 aa16.96■□□□□ 0.31
PVT1-218ENST00000523328 CREBL2O60519 120 aaPredicted RBP16.96■□□□□ 0.31
PVT1-218ENST00000523328 SPHARQ15513 63 aa16.96■□□□□ 0.31
PVT1-218ENST00000523328 C2orf76Q3KRA6 126 aa16.96■□□□□ 0.31
PVT1-218ENST00000523328 CEMP1Q6PRD7 247 aaPredicted RBP16.96■□□□□ 0.31
PVT1-218ENST00000523328 TMEM91Q6ZNR0 172 aa16.96■□□□□ 0.31
PVT1-218ENST00000523328 RPP25LQ8N5L8 163 aaKnown RBP16.96■□□□□ 0.31
PVT1-218ENST00000523328 MAFIPQ8WZ33 124 aa16.96■□□□□ 0.31
PVT1-218ENST00000523328 FAM3DQ96BQ1 224 aa16.96■□□□□ 0.31
PVT1-218ENST00000523328 PCLOQ9Y6V0 5065 aa16.95■□□□□ 0.3
PVT1-218ENST00000523328 A8MWP6 167 aa16.95■□□□□ 0.3
PVT1-218ENST00000523328 TEX22C9J3V5 150 aa16.95■□□□□ 0.3
PVT1-218ENST00000523328 MRPS15P82914 257 aaKnown RBP16.95■□□□□ 0.3
PVT1-218ENST00000523328 TNFRSF9Q07011 255 aa16.95■□□□□ 0.3
PVT1-218ENST00000523328 SLC25A42Q86VD7 318 aa16.95■□□□□ 0.3
PVT1-218ENST00000523328 TMEM203Q969S6 136 aa16.95■□□□□ 0.3
PVT1-218ENST00000523328 C8orf4Q9NR00 106 aa16.95■□□□□ 0.3
PVT1-218ENST00000523328 FBXL7Q9UJT9 491 aa16.95■□□□□ 0.3
PVT1-218ENST00000523328 DENRO43583 198 aaKnown RBP16.94■□□□□ 0.3
PVT1-218ENST00000523328 SCAF4O95104 1147 aaKnown RBP16.94■□□□□ 0.3
PVT1-218ENST00000523328 IGHV3-23P01764 117 aa16.94■□□□□ 0.3
PVT1-218ENST00000523328 ARL3P36405 182 aa16.94■□□□□ 0.3
PVT1-218ENST00000523328 LIPKQ5VXJ0 399 aa16.94■□□□□ 0.3
PVT1-218ENST00000523328 CLEC19AQ6UXS0 136 aa16.94■□□□□ 0.3
PVT1-218ENST00000523328 LYG2Q86SG7 212 aa16.94■□□□□ 0.3
PVT1-218ENST00000523328 H1FOOQ8IZA3 346 aaPredicted RBP16.94■□□□□ 0.3
PVT1-218ENST00000523328 UXS1Q8NBZ7 420 aa16.94■□□□□ 0.3
PVT1-218ENST00000523328 FANCD2OSQ96PS1 177 aa16.94■□□□□ 0.3
PVT1-218ENST00000523328 GINS4Q9BRT9 223 aa16.94■□□□□ 0.3
PVT1-218ENST00000523328 TMEM272A0A1B0GTI8 110 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 NPIPB5A8MRT5 1133 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 E7EUB6 86 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 NDUFB8O95169 186 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 IL6RP08887 468 aaPredicted RBP16.93■□□□□ 0.3
PVT1-218ENST00000523328 ANKRD55Q3KP44 614 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 TM4SF20Q53R12 229 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 RAB3CQ96E17 227 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 TP53TG1Q9Y2A0 90 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 S4R3C0 116 aa16.93■□□□□ 0.3
PVT1-218ENST00000523328 A0A1B0GW64 132 aa16.92■□□□□ 0.3
PVT1-218ENST00000523328 ZNF320A2RRD8 509 aa16.92■□□□□ 0.3
PVT1-218ENST00000523328 FCGR3BO75015 233 aa16.92■□□□□ 0.3
PVT1-218ENST00000523328 MED22Q15528 200 aa16.92■□□□□ 0.3
PVT1-218ENST00000523328 FAM106AQ4KMX7 169 aa16.92■□□□□ 0.3
PVT1-218ENST00000523328 BTNL8Q6UX41 500 aa16.92■□□□□ 0.3
PVT1-218ENST00000523328 MFNGO00587 321 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 GNB3P16520 340 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 BMI1P35226 326 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 MAP2K4P45985 399 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 RPS25P62851 125 aaKnown RBP16.91■□□□□ 0.3
PVT1-218ENST00000523328 KLK9Q2XQG4 91 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 Q6ZWC4 215 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 VKORC1L1Q8N0U8 176 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 UFD1Q92890 307 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 DCUN1D5Q9BTE7 237 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 OR51E2Q9H255 320 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 KLK9Q9UKQ9 250 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 RAB22AQ9UL26 194 aa16.91■□□□□ 0.3
PVT1-218ENST00000523328 IGKV1D-8A0A087WSZ0 117 aa16.9■□□□□ 0.3
PVT1-218ENST00000523328 SPRY2O43597 315 aa16.9■□□□□ 0.3
PVT1-218ENST00000523328 ARL6IP5O75915 188 aa16.9■□□□□ 0.3
PVT1-218ENST00000523328 CRYGCP07315 174 aa16.9■□□□□ 0.3
PVT1-218ENST00000523328 ATF4P18848 351 aaPredicted RBP16.9■□□□□ 0.3
PVT1-218ENST00000523328 OR4A47Q6IF82 309 aa16.9■□□□□ 0.3
PVT1-218ENST00000523328 Q6ZS49 121 aa16.9■□□□□ 0.3
PVT1-218ENST00000523328 SLC2A9Q9NRM0 540 aa16.9■□□□□ 0.3
PVT1-218ENST00000523328 KLK5Q9Y337 293 aaPredicted RBP16.9■□□□□ 0.3
PVT1-218ENST00000523328 TRAV25A0A0B4J276 109 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 PTGES3LE9PB15 166 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 RAB27BO00194 218 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 DEDDO75618 318 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 ZNF735P0CB33 412 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 C8orf88P0DMB2 117 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 AREGP15514 252 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 RPL27AP46776 148 aaKnown RBP16.89■□□□□ 0.29
PVT1-218ENST00000523328 RPL30P62888 115 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms