RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RNF212Q495C1 297 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 AWAT2Q6E213 333 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 SPATA12Q7Z6I5 190 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 TMEM190Q8WZ59 177 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 EXOGQ9Y2C4 368 aaKnown RBP9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 FAT1Q14517 4588 aa9.96□□□□□ -0.82
NKX3-1-202ENST00000523261 TRBV7-1A0A0A6YYK4 115 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 MFSD2BA6NFX1 497 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 GPR183P32249 361 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 GTF2A1P52655 376 aaPredicted RBP9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 CMC4P56277 68 aaPredicted RBP9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 RTL8BQ17RB0 113 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 KLK9Q2XQG4 91 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 MOB1BQ7L9L4 216 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 C6orf201Q7Z4U5 140 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 SETD6Q8TBK2 473 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 DAZ1Q9NQZ3 744 aaKnown RBP9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 KLK9Q9UKQ9 250 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
NKX3-1-202ENST00000523261 ZNF705EA8MWA4 302 aaPredicted RBP9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 B2RBV5 119 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 MRPS14O60783 128 aaKnown RBP9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 RPA2P15927 270 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 GBX2P52951 348 aaPredicted RBP9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 HLA-DRB3P79483 266 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 TAGLNQ01995 201 aaKnown RBP9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 MMD2Q8IY49 270 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 JAGN1Q8N5M9 183 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 LGALS12Q96DT0 336 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 NEDD4LQ96PU5 975 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 FYTTD1Q96QD9 318 aaKnown RBP9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 THTPAQ9BU02 230 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 CHMP1AQ9HD42 196 aaPredicted RBP9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 SDHAF2Q9NX18 166 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 X6R8D5 127 aa9.94□□□□□ -0.82
NKX3-1-202ENST00000523261 TRAV8-7A0A075B6U6 113 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 CREBL2O60519 120 aaPredicted RBP9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 CRYZL1O95825 349 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 CRYGCP07315 174 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 IL6RP08887 468 aaPredicted RBP9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 SAA1P0DJI8 122 aaPredicted RBP9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 RRASP10301 218 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 CDK10Q15131 360 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 PLET1Q6UQ28 207 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 MYCBPQ99417 103 aaPredicted RBP9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 CIB1Q99828 191 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 IMPAD1Q9NX62 359 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 ETV7Q9Y603 341 aa9.93□□□□□ -0.82
NKX3-1-202ENST00000523261 TRBV6-6A0A0A6YYG2 114 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 IGKV1-6A0A0C4DH72 117 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 A0A1B0GW64 132 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 DPPA5A6NC42 116 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 E7EUB6 86 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 AREGP15514 252 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 HIST1H1BP16401 226 aaKnown RBP9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 TFPI2P48307 235 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 Q5VSD8 79 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 XAF1Q6GPH4 301 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 SSX9Q7RTT3 188 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 C6orf223Q8N319 242 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 ZNF502Q8TBZ5 544 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 CXorf58Q96LI9 332 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 SLC2A9Q9NRM0 540 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 ERVK13-1Q9NX77 482 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 RDH8Q9NYR8 311 aa9.92□□□□□ -0.82
NKX3-1-202ENST00000523261 IGLV11-55A0A075B6I3 123 aa9.91□□□□□ -0.82
NKX3-1-202ENST00000523261 G3V2T6 193 aa9.91□□□□□ -0.82
NKX3-1-202ENST00000523261 KRTAP10-2P60368 255 aa9.91□□□□□ -0.82
NKX3-1-202ENST00000523261 OSR1Q8TAX0 266 aaPredicted RBP9.91□□□□□ -0.82
NKX3-1-202ENST00000523261 GABARAPL3Q9BY60 117 aa9.91□□□□□ -0.82
NKX3-1-202ENST00000523261 GABARAPL1Q9H0R8 117 aa9.91□□□□□ -0.82
NKX3-1-202ENST00000523261 OR2D2Q9H210 308 aa9.91□□□□□ -0.82
NKX3-1-202ENST00000523261 TGOLN2O43493 480 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 DHFRP00374 187 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 TPBGQ13641 420 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 IRF3Q14653 427 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 LIPKQ5VXJ0 399 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 SPATA24Q86W54 205 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 CDH26Q8IXH8 852 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 TRUB1Q8WWH5 349 aaKnown RBP9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 RNF2Q99496 336 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 HDHD3Q9BSH5 251 aaPredicted RBP9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 CKLFQ9UBR5 152 aa9.9□□□□□ -0.82
NKX3-1-202ENST00000523261 IGHV3OR16-8A0A075B7F1 116 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 TRBV5-5A0A0J9YX44 114 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 TCRBV3S1A0A5B6 114 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 K7EMT4 169 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 ZNF207O43670 478 aaKnown RBP9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 ZNF735P0CB33 412 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 NPY1RP25929 384 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 RPL27AP46776 148 aaKnown RBP9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 MEDAGQ5VYS4 303 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 RPL22L1Q6P5R6 122 aaKnown RBP9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 LYPD1Q8N2G4 141 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 FAM210BQ96KR6 192 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 C20orf24Q9BUV8 137 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 RIMS4Q9H426 269 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms