RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 FXYD3Q14802 87 aa17.13■□□□□ 0.33
HOXA3-205ENST00000522456 LCNL1Q6ZST4 164 aa17.13■□□□□ 0.33
HOXA3-205ENST00000522456 TEX45Q8NA69 505 aa17.13■□□□□ 0.33
HOXA3-205ENST00000522456 FAM103A1Q9BTL3 118 aaKnown RBP17.13■□□□□ 0.33
HOXA3-205ENST00000522456 NXF2Q9GZY0 626 aaKnown RBP17.13■□□□□ 0.33
HOXA3-205ENST00000522456 RABL2AQ9UBK7 228 aaPredicted RBP17.13■□□□□ 0.33
HOXA3-205ENST00000522456 RABL2BQ9UNT1 228 aa17.13■□□□□ 0.33
HOXA3-205ENST00000522456 NUDT19A8MXV4 375 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 CD3DP04234 171 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 EGR2P11161 476 aaPredicted RBP17.12■□□□□ 0.33
HOXA3-205ENST00000522456 TNFSF8P32971 234 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 KIR2DS2P43631 304 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 CATR1Q13166 79 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 RNASE10Q5GAN6 216 aaKnown RBP17.12■□□□□ 0.33
HOXA3-205ENST00000522456 VAX1Q5SQQ9 334 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 TMEM65Q6PI78 240 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 IDO2Q6ZQW0 420 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 SPAG16Q8N0X2 631 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 ARPC1AQ92747 370 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 AURKAIP1Q9NWT8 199 aaPredicted RBP17.12■□□□□ 0.33
HOXA3-205ENST00000522456 NUBP2Q9Y5Y2 271 aa17.12■□□□□ 0.33
HOXA3-205ENST00000522456 ARPC1BO15143 372 aaKnown RBP17.11■□□□□ 0.33
HOXA3-205ENST00000522456 PF4P02776 101 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 SLC6A1P30531 599 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 BRWD1-AS2P59051 145 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 AADACL3Q5VUY0 350 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 LPCAT3Q6P1A2 487 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 CMTM1Q8IZ96 169 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 MINDY2Q8NBR6 621 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 OR51H1Q8NH63 302 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 GRPEL2Q8TAA5 225 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 FXYD6Q9H0Q3 95 aa17.11■□□□□ 0.33
HOXA3-205ENST00000522456 A0A1W2PN81 502 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 FABP12A6NFH5 140 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 SAA1P0DJI8 122 aaPredicted RBP17.1■□□□□ 0.33
HOXA3-205ENST00000522456 TBPP20226 339 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 PSMB8P28062 276 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 CHRNA7P36544 502 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 CRIP2P52943 208 aaPredicted RBP17.1■□□□□ 0.33
HOXA3-205ENST00000522456 AKIRIN2Q53H80 203 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 UNQ5815/PRO19632Q6UWF5 114 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 VKORC1L1Q8N0U8 176 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 RNF152Q8N8N0 203 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 TMEM229BQ8NBD8 167 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 KLHL30-AS1Q8NEE0 82 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 LFNGQ8NES3 379 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 TINAGL1Q9GZM7 467 aaPredicted RBP17.1■□□□□ 0.33
HOXA3-205ENST00000522456 NOTCH3Q9UM47 2321 aa17.1■□□□□ 0.33
HOXA3-205ENST00000522456 GPR31O00270 319 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 CTDSPLO15194 276 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 RAMP3O60896 148 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 PGLYRP1O75594 196 aaPredicted RBP17.09■□□□□ 0.33
HOXA3-205ENST00000522456 HRASP01112 189 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 IGLV1-40P01703 118 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 TAS2R19P59542 299 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 SSBP1Q04837 148 aaKnown RBP17.09■□□□□ 0.33
HOXA3-205ENST00000522456 PRSS8Q16651 343 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 C18orf65Q6ZTR6 163 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 ZNF695Q8IW36 515 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 TCTEX1D1Q8N7M0 179 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 POC5Q8NA72 575 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 SMIM4Q8WVI0 70 aa17.09■□□□□ 0.33
HOXA3-205ENST00000522456 FOXA2Q9Y261 457 aaPredicted RBP17.09■□□□□ 0.33
HOXA3-205ENST00000522456 RLN1P04808 185 aa17.08■□□□□ 0.32
HOXA3-205ENST00000522456 CD33P20138 364 aa17.08■□□□□ 0.32
HOXA3-205ENST00000522456 S100A5P33763 92 aa17.08■□□□□ 0.32
HOXA3-205ENST00000522456 TNXAQ16473 311 aa17.08■□□□□ 0.32
HOXA3-205ENST00000522456 C19orf54Q5BKX5 351 aa17.08■□□□□ 0.32
HOXA3-205ENST00000522456 C8orf86Q6ZUL3 223 aa17.08■□□□□ 0.32
HOXA3-205ENST00000522456 AIFM2Q9BRQ8 373 aa17.08■□□□□ 0.32
HOXA3-205ENST00000522456 KLK15Q9H2R5 256 aa17.08■□□□□ 0.32
HOXA3-205ENST00000522456 RBFOX2O43251 390 aaKnown RBP eCLIP17.07■□□□□ 0.32
HOXA3-205ENST00000522456 CREBL2O60519 120 aaPredicted RBP17.07■□□□□ 0.32
HOXA3-205ENST00000522456 ACTL6BO94805 426 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 OR2A4O95047 310 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 RAB3DO95716 219 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 S100GP29377 79 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 CDX1P47902 265 aaPredicted RBP17.07■□□□□ 0.32
HOXA3-205ENST00000522456 SSBP2P81877 361 aaPredicted RBP17.07■□□□□ 0.32
HOXA3-205ENST00000522456 MRGPRG-AS1Q2M3A8 158 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 PHLDA2Q53GA4 152 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 STEAP1BQ6NZ63 245 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 SSX9Q7RTT3 188 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 ARRDC1Q8N5I2 433 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 VSTM2AQ8TAG5 236 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 CD300LFQ8TDQ1 290 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 RHOVQ96L33 236 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 OR2A7Q96R45 310 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 RSRP1Q9BUV0 290 aa17.07■□□□□ 0.32
HOXA3-205ENST00000522456 ZNF430Q9H8G1 570 aaPredicted RBP17.07■□□□□ 0.32
HOXA3-205ENST00000522456 SOX15O60248 233 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 HPRT1P00492 218 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 CD74P04233 296 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 CD40LGP29965 261 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 RAB9AP51151 201 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 UCP3P55916 312 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 FOXB2Q5VYV0 432 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 MMD2Q8IY49 270 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 SLC38A6Q8IZM9 456 aa17.06■□□□□ 0.32
HOXA3-205ENST00000522456 WFDC9Q8NEX5 89 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms