RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CD5LO43866 347 aa17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 CD24P25063 80 aa17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 KRTAP1-1Q07627 177 aa17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 THOC7Q6I9Y2 204 aaKnown RBP17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 SPIN2AQ99865 258 aa17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 SPIN2BQ9BPZ2 258 aa17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 MS4A7Q9GZW8 240 aaPredicted RBP17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 RANBP3Q9H6Z4 567 aaPredicted RBP17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 NUP50Q9UKX7 468 aa17.2■□□□□ 0.34
R3HCC1-208ENST00000522012 VENTXO95231 258 aa17.19■□□□□ 0.34
R3HCC1-208ENST00000522012 HABP2Q14520 560 aaPredicted RBP17.19■□□□□ 0.34
R3HCC1-208ENST00000522012 FAM219AQ8IW50 185 aa17.19■□□□□ 0.34
R3HCC1-208ENST00000522012 RITA1Q96K30 269 aa17.19■□□□□ 0.34
R3HCC1-208ENST00000522012 RHOVQ96L33 236 aa17.19■□□□□ 0.34
R3HCC1-208ENST00000522012 AIFM2Q9BRQ8 373 aa17.19■□□□□ 0.34
R3HCC1-208ENST00000522012 YAE1D1Q9NRH1 226 aa17.19■□□□□ 0.34
R3HCC1-208ENST00000522012 CCDC168Q8NDH2 2452 aa17.19■□□□□ 0.34
R3HCC1-208ENST00000522012 SRRM4A7MD48 611 aaKnown RBP17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 IGKV1D-33P01593 117 aa17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 IGKV1-33P01594 117 aa17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 BRS3P32247 399 aa17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 BPIFB3P59826 476 aa17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 RAP2BP61225 183 aa17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 CYCSP99999 105 aaKnown RBP17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 HES1Q14469 280 aa17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 ZBTB8BQ8NAP8 495 aaPredicted RBP17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 MAP1AP78559 2803 aaPredicted RBP17.18■□□□□ 0.34
R3HCC1-208ENST00000522012 A0A1B0GU03 582 aa17.17■□□□□ 0.34
R3HCC1-208ENST00000522012 SNRNP70P08621 437 aaKnown RBP17.17■□□□□ 0.34
R3HCC1-208ENST00000522012 SRSF4Q08170 494 aaKnown RBP17.17■□□□□ 0.34
R3HCC1-208ENST00000522012 HNF4GQ14541 408 aa17.17■□□□□ 0.34
R3HCC1-208ENST00000522012 Q6ZRM9 215 aa17.17■□□□□ 0.34
R3HCC1-208ENST00000522012 TMEM140Q9NV12 185 aa17.17■□□□□ 0.34
R3HCC1-208ENST00000522012 CACNG5Q9UF02 275 aa17.17■□□□□ 0.34
R3HCC1-208ENST00000522012 SMLR1H3BR10 107 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 FSHBP01225 129 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 P0C879 139 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 LGALS7P47929 136 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 SMCO1Q147U7 214 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 FAM120AOSQ5T036 256 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 OR4A47Q6IF82 309 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 OR2T35Q8NGX2 323 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 OR1S1Q8NH92 325 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 ASB13Q8WXK3 278 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 NMES1Q9C002 83 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 MOSP00540 346 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 FBP1P09467 338 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 POU2AF1Q16633 256 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 TCTE3Q8IZS6 198 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 OR2T10Q8NGZ9 312 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 MEGF9Q9H1U4 602 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 NSG2Q9Y328 171 aa17.16■□□□□ 0.34
R3HCC1-208ENST00000522012 WNK2Q9Y3S1 2297 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 F8P00451 2351 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 RBMXL2O75526 392 aaKnown RBP17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 SCGB1D2O95969 90 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 IGLV2-23P01705 113 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 OR9G9P0C7N8 305 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 FAM106CPP0CH98 169 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 SAA1P0DJI8 122 aaPredicted RBP17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 SLC25A6P12236 298 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 VMA21Q3ZAQ7 101 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 LRRC37A5PQ49AS3 106 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 BCL6BQ8N143 479 aaPredicted RBP17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 TEX29Q8N6K0 151 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 C22orf15Q8WYQ4 148 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 EAF1Q96JC9 268 aaPredicted RBP17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 TSNAXQ99598 290 aaKnown RBP17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 RNF5Q99942 180 aa17.15■□□□□ 0.34
R3HCC1-208ENST00000522012 FAM90A9PA6NNJ1 464 aa17.14■□□□□ 0.33
R3HCC1-208ENST00000522012 NXPH3O95157 252 aa17.14■□□□□ 0.33
R3HCC1-208ENST00000522012 CNTFRP26992 372 aa17.14■□□□□ 0.33
R3HCC1-208ENST00000522012 Q5BKY6 102 aa17.14■□□□□ 0.33
R3HCC1-208ENST00000522012 IL17RELQ6ZVW7 336 aa17.14■□□□□ 0.33
R3HCC1-208ENST00000522012 OR4A16Q8NH70 328 aa17.14■□□□□ 0.33
R3HCC1-208ENST00000522012 PPP1R1CQ8WVI7 109 aa17.14■□□□□ 0.33
R3HCC1-208ENST00000522012 TRAV3A0A0B4J244 114 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 SLC25A17O43808 307 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 SNAPC5O75971 98 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 UBE2KP61086 200 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 IL15RAQ13261 267 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 SPNS3Q6ZMD2 512 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 OR4D5Q8NGN0 318 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 SMR3AQ99954 134 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 ITPR3Q14573 2671 aa17.13■□□□□ 0.33
R3HCC1-208ENST00000522012 PITX3O75364 302 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 TMEM11P17152 192 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 OR2B8PP59922 312 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 S100A10P60903 97 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 PSG5Q15238 335 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 DEFB112Q30KQ8 113 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 FBLN7Q53RD9 439 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 CXorf66Q5JRM2 361 aaPredicted RBP17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 THNSL2Q86YJ6 484 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 FOXRED2Q8IWF2 684 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 PUSL1Q8N0Z8 303 aaKnown RBP17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 VSTM2AQ8TAG5 236 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 COA4Q9NYJ1 87 aa17.12■□□□□ 0.33
R3HCC1-208ENST00000522012 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.12■□□□□ 0.336e-7■■■■□ 25.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms