RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ITLN2Q8WWU7 325 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC9-210ENST00000521667 TMEM231Q9H6L2 316 aa15.12■□□□□ 0.01
TRAPPC9-210ENST00000521667 LY86O95711 162 aa15.11■□□□□ 0.01
TRAPPC9-210ENST00000521667 AGAP20933 346 aa15.11■□□□□ 0.01
TRAPPC9-210ENST00000521667 SPCS3P61009 180 aa15.11■□□□□ 0.01
TRAPPC9-210ENST00000521667 THNSL2Q86YJ6 484 aa15.11■□□□□ 0.01
TRAPPC9-210ENST00000521667 COMMD1Q8N668 190 aa15.11■□□□□ 0.01
TRAPPC9-210ENST00000521667 C8orf31Q8N9H6 132 aa15.11■□□□□ 0.01
TRAPPC9-210ENST00000521667 RHOVQ96L33 236 aa15.11■□□□□ 0.01
TRAPPC9-210ENST00000521667 RALYQ9UKM9 306 aaKnown RBP15.11■□□□□ 0.01
TRAPPC9-210ENST00000521667 PPIHO43447 177 aaKnown RBP15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 LRRC75BQ2VPJ9 315 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 PARD6GQ9BYG4 376 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 UQCC1Q9NVA1 299 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 FAM96BQ9Y3D0 163 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 TRAV3A0A0B4J244 114 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 HRASP01112 189 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 SOD3P08294 240 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 POU2AF1Q16633 256 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 RTL8BQ17RB0 113 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 PDLIM3Q53GG5 364 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 AKR1C8PQ5T2L2 129 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 DHRS7BQ6IAN0 325 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 ZNF429Q86V71 674 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 LINC00311Q8N616 119 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 ZNF596Q8TC21 504 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 SLC35D1Q9NTN3 355 aa15.1■□□□□ 0.01
TRAPPC9-210ENST00000521667 PMS2P5A8MQ11 134 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 RNASEK-C17orf49H0YIS7 233 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 OR8U8P0C7N1 319 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 SNCAP37840 140 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 HCFC1P51610 2035 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 ATP6V1FQ16864 119 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 AVPI1Q5T686 147 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 OR4A47Q6IF82 309 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 ZNF841Q6ZN19 808 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 WDR61Q9GZS3 305 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 EPG5Q9HCE0 2579 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 FBXO7Q9Y3I1 522 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 A0A087X0M5 115 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 A0A1B0GX30 115 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 J3QR06 171 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 CD5P06127 495 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 IGHV1-8P0DP01 117 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 OR10P1Q8NGE3 313 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 OR10X1Q8NGY0 326 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 PINX1Q96BK5 328 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 CLCC1Q96S66 551 aa15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 PSMG3Q9BT73 122 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 MS4A7Q9GZW8 240 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-210ENST00000521667 C15orf61A6NNL5 157 aa15.08■□□□□ 0
TRAPPC9-210ENST00000521667 GPR37O15354 613 aa15.08■□□□□ 0
TRAPPC9-210ENST00000521667 ADCYAP1P18509 176 aa15.08■□□□□ 0
TRAPPC9-210ENST00000521667 DVL1P1P54792 670 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-210ENST00000521667 DPPA3Q6W0C5 159 aa15.08■□□□□ 0
TRAPPC9-210ENST00000521667 OR13D1Q8NGV5 346 aa15.08■□□□□ 0
TRAPPC9-210ENST00000521667 NEU4Q8WWR8 484 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-210ENST00000521667 RSG1Q9BU20 258 aa15.08■□□□□ 0
TRAPPC9-210ENST00000521667 MRPL20Q9BYC9 149 aaKnown RBP15.08■□□□□ 0
TRAPPC9-210ENST00000521667 UBE2L5PA0A1B0GUS4 154 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 GNB2P62879 340 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 DEFA5Q01523 94 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 FAM71F2Q6NXP2 309 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 DTX2Q86UW9 622 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 C11orf42Q8N5U0 333 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 OR9G1Q8NH87 305 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 TMEM186Q96B77 213 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 TMEM147Q9BVK8 224 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 FOXA2Q9Y261 457 aaPredicted RBP15.07■□□□□ 0
TRAPPC9-210ENST00000521667 C15orf62A8K5M9 175 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 F8W036 122 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 LY6HO94772 140 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 SCAF4O95104 1147 aaKnown RBP15.07■□□□□ 0
TRAPPC9-210ENST00000521667 IGKV1-16P04430 117 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 ARG1P05089 322 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 RPP30P78346 268 aaKnown RBP15.07■□□□□ 0
TRAPPC9-210ENST00000521667 LFNGQ8NES3 379 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 TAF15Q92804 592 aaKnown RBP eCLIP15.07■□□□□ 0
TRAPPC9-210ENST00000521667 HIPK2Q9H2X6 1198 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 TCF19Q9Y242 345 aa15.07■□□□□ 0
TRAPPC9-210ENST00000521667 APOA2P02652 100 aa15.06■□□□□ 0
TRAPPC9-210ENST00000521667 VDAC2P45880 294 aaPredicted RBP15.06■□□□□ 0
TRAPPC9-210ENST00000521667 TAGLNQ01995 201 aaKnown RBP15.06■□□□□ 0
TRAPPC9-210ENST00000521667 C10orf91Q5T1B1 145 aa15.06■□□□□ 0
TRAPPC9-210ENST00000521667 ABHD12Q8N2K0 398 aa15.06■□□□□ 0
TRAPPC9-210ENST00000521667 OR8B3Q8NGG8 313 aa15.06■□□□□ 0
TRAPPC9-210ENST00000521667 OR8B2Q96RD0 313 aa15.06■□□□□ 0
TRAPPC9-210ENST00000521667 TMEM133Q9H2Q1 129 aa15.06■□□□□ 0
TRAPPC9-210ENST00000521667 TMEM14BQ9NUH8 114 aa15.06■□□□□ 0
TRAPPC9-210ENST00000521667 LRBAP50851 2863 aa15.06■□□□□ 0
TRAPPC9-210ENST00000521667 H2AFB1P0C5Y9 115 aa15.05■□□□□ 0
TRAPPC9-210ENST00000521667 M6PRP20645 277 aa15.05■□□□□ 0
TRAPPC9-210ENST00000521667 RPS16P62249 146 aaKnown RBP15.05■□□□□ 0
TRAPPC9-210ENST00000521667 GUK1Q16774 197 aa15.05■□□□□ 0
TRAPPC9-210ENST00000521667 OR5AN1Q8NGI8 311 aa15.05■□□□□ 0
TRAPPC9-210ENST00000521667 SUN5Q8TC36 379 aa15.05■□□□□ 0
TRAPPC9-210ENST00000521667 RAB1CQ92928 201 aa15.05■□□□□ 0
TRAPPC9-210ENST00000521667 RBMXL1Q96E39 390 aaKnown RBP15.05■□□□□ 0
TRAPPC9-210ENST00000521667 TIMD4Q96H15 378 aa15.05■□□□□ 0
TRAPPC9-210ENST00000521667 AIFM2Q9BRQ8 373 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms