RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-204	ENST00000521331	CD7	P09564	240 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	RBMY1D	P0C7P1	496 aa	Known RBP	11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	ZNF45	Q02386	682 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	IRF3	Q14653	427 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	IDO2	Q6ZQW0	420 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	SLC25A42	Q86VD7	318 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	TTC9C	Q8N5M4	171 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	VCX3B	Q9H321	246 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	ZC4H2	Q9NQZ6	224 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	KCNK7	Q9Y2U2	307 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331		V9GY05	133 aa		11.23	□□□□□ -0.61
PRKDC-204	ENST00000521331	TMEM272	A0A1B0GTI8	110 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	C2orf70	A6NJV1	201 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	HSMCR30	P0CW71	290 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	GADD45A	P24522	165 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	KIR2DS2	P43631	304 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	RPS25	P62851	125 aa	Known RBP	11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	CDK10	Q15131	360 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	GUCA2B	Q16661	112 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	C15orf32	Q32M92	178 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	MMD2	Q8IY49	270 aa		11.22	□□□□□ -0.61
PRKDC-204	ENST00000521331	LINC00473	A8K010	186 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	LGALS9	O00182	355 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	MFNG	O00587	321 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	GGCT	O75223	188 aa	Known RBP	11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	SAA1	P0DJI8	122 aa	Predicted RBP	11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	FOLR2	P14207	255 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	GNB3	P16520	340 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331		Q6ZS49	121 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	SLC16A13	Q7RTY0	426 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	OR10R2	Q8NGX6	335 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	WFDC10A	Q9H1F0	79 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	NDUFA13	Q9P0J0	144 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	ZNF257	Q9Y2Q1	563 aa		11.21	□□□□□ -0.61
PRKDC-204	ENST00000521331	OR2J3	O76001	311 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	HIST1H1D	P16402	221 aa	Known RBP	11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	TALDO1	P37837	337 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	MAP2K4	P45985	399 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	MLLT11	Q13015	90 aa	Predicted RBP	11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	PLA2G7	Q13093	441 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	HES5	Q5TA89	166 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	MAFIP	Q8WZ33	124 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	DCUN1D5	Q9BTE7	237 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	ACOT13	Q9NPJ3	140 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	PRELID3B	Q9Y3B1	194 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331	TPRKB	Q9Y3C4	175 aa		11.2	□□□□□ -0.62
PRKDC-204	ENST00000521331		A0A075B6Q4	140 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	PPP5D1	E7EU14	171 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	PDCD5	O14737	125 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	RAB6A	P20340	208 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	FABP5	Q01469	135 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	C10orf55	Q5SWW7	151 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	IZUMO2	Q6UXV1	221 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	GPHB5	Q86YW7	130 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	ZNF645	Q8N7E2	425 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	WDR89	Q96FK6	387 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	MRPS7	Q9Y2R9	242 aa	Known RBP	11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	DMRT1	Q9Y5R6	373 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	ALMS1	Q8TCU4	4167 aa		11.19	□□□□□ -0.62
PRKDC-204	ENST00000521331	PLEC	Q15149	4684 aa	Known RBP	11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	HYDIN	Q4G0P3	5121 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	SMIM31	A0A1B0GVY4	71 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	METTL21EP	A6NDL7	271 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	NPIPB5	A8MRT5	1133 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	RAB27B	O00194	218 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	RGS10	O43665	173 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	FCGR3B	O75015	233 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	SLC22A5	O76082	557 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	OR2C1	O95371	312 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	HLA-A	P01891	365 aa	Known RBP	11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	CD36	P16671	472 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	ARFRP1	Q13795	201 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	ARL6IP1	Q15041	203 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	SSX1	Q16384	188 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	ZNF57	Q68EA5	555 aa	Predicted RBP	11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	KCTD9	Q7L273	389 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	VSTM2A	Q8TAG5	236 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	OR51E2	Q9H255	320 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	FBXL7	Q9UJT9	491 aa		11.18	□□□□□ -0.62
PRKDC-204	ENST00000521331	TEX22	C9J3V5	150 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	DHFR	P00374	187 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	CTXN2	P0C2S0	81 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	CBLN1	P23435	193 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	DTYMK	P23919	212 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	MAS1L	P35410	378 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	ARL3	P36405	182 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	ANKRD55	Q3KP44	614 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	FAM106A	Q4KMX7	169 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	LINC00476	Q8WZB0	136 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	MGLL	Q99685	303 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	GGTLC1	Q9BX51	225 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	DUSP21	Q9H596	190 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	SLC2A9	Q9NRM0	540 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	OR2W1	Q9Y3N9	320 aa		11.17	□□□□□ -0.62
PRKDC-204	ENST00000521331	TRAV1-2	A0A0B4J238	106 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	HMX3	A6NHT5	357 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	IFITM5	A6NNB3	132 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms