RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 LYSTQ99698 3801 aa8.62□□□□□ -1.03
MRPS28-206ENST00000520946 CENPOQ9BU64 300 aa8.62□□□□□ -1.03
MRPS28-206ENST00000520946 ZNF430Q9H8G1 570 aaPredicted RBP8.62□□□□□ -1.03
MRPS28-206ENST00000520946 S100A14Q9HCY8 104 aa8.62□□□□□ -1.03
MRPS28-206ENST00000520946 ZNF257Q9Y2Q1 563 aa8.62□□□□□ -1.03
MRPS28-206ENST00000520946 MRPS7Q9Y2R9 242 aaKnown RBP8.62□□□□□ -1.03
MRPS28-206ENST00000520946 PRELID3BQ9Y3B1 194 aa8.62□□□□□ -1.03
MRPS28-206ENST00000520946 CSMD3Q7Z407 3707 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 STARD9Q9P2P6 4700 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 TRBV9A0A0B4J1U6 114 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 IGKV1-6A0A0C4DH72 117 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 UBE2CO00762 179 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 FCGR3BO75015 233 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 DEDDO75618 318 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 SAA1P0DJI8 122 aaPredicted RBP8.61□□□□□ -1.03
MRPS28-206ENST00000520946 QRFPP83859 136 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 ZNF45Q02386 682 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 TNFRSF9Q07011 255 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 CDK10Q15131 360 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 IGSF11Q5DX21 431 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 BTNL8Q6UX41 500 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 Q6ZWC4 215 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 DHRSXQ8N5I4 330 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 NANOGP1Q8N7R0 232 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 BPIFB6Q8NFQ5 453 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 TP53TG1Q9Y2A0 90 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 S4R3C0 116 aa8.61□□□□□ -1.03
MRPS28-206ENST00000520946 A0A075B6Q4 140 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 TRAV25A0A0B4J276 109 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 HMX3A6NHT5 357 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 J3QRK9 145 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 DENRO43583 198 aaKnown RBP8.6□□□□□ -1.03
MRPS28-206ENST00000520946 IFNA4P05014 189 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 EDN2P20800 178 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 CRHBPP24387 322 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 GADD45AP24522 165 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 C8orf59Q8N0T1 100 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-206ENST00000520946 FAM89BQ8N5H3 189 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 OR2C3Q8N628 320 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 VSTM2AQ8TAG5 236 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 PHLDA1Q8WV24 401 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-206ENST00000520946 MARC2Q969Z3 335 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 RAB3CQ96E17 227 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 MND1Q9BWT6 205 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 C6orf62Q9GZU0 229 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-206ENST00000520946 MLXQ9UH92 298 aa8.6□□□□□ -1.03
MRPS28-206ENST00000520946 SLC17A2O00624 439 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 MYOD1P15172 320 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 HIST1H1BP16401 226 aaKnown RBP8.59□□□□□ -1.03
MRPS28-206ENST00000520946 CD36P16671 472 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 DUTP33316 252 aaKnown RBP8.59□□□□□ -1.03
MRPS28-206ENST00000520946 RPL27AP46776 148 aaKnown RBP8.59□□□□□ -1.03
MRPS28-206ENST00000520946 PSMD7P51665 324 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 TMEM50BP56557 158 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 ARFRP1Q13795 201 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 OR2B11Q5JQS5 317 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 C10orf55Q5SWW7 151 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 LGALS9CQ6DKI2 356 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 LAMTOR1Q6IAA8 161 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 TMEM203Q969S6 136 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 OR51E2Q9H255 320 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 UBQLN2Q9UHD9 624 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 PSORS1C1Q9UIG5 152 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 UFC1Q9Y3C8 167 aa8.59□□□□□ -1.03
MRPS28-206ENST00000520946 AK6Q9Y3D8 172 aaKnown RBP8.59□□□□□ -1.03
MRPS28-206ENST00000520946 HYDINQ4G0P3 5121 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 TRBV6-7A0A0A0MS04 114 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 TRBV7-1A0A0A6YYK4 115 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 TMEM213A2RRL7 107 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 NPIPB5A8MRT5 1133 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 ARL6IP5O75915 188 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 CLEC3BP05452 202 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 FCGR3AP08637 254 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
MRPS28-206ENST00000520946 CLDN12P56749 244 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 C2orf76Q3KRA6 126 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 PLET1Q6UQ28 207 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 KCTD9Q7L273 389 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 MAFIPQ8WZ33 124 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 UFD1Q92890 307 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 FAM3DQ96BQ1 224 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 CXorf58Q96LI9 332 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 OR2A7Q96R45 310 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 CABLES2Q9BTV7 478 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 MRPL27Q9P0M9 148 aaKnown RBP8.58□□□□□ -1.04
MRPS28-206ENST00000520946 FBXL17Q9UF56 701 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 RAB22AQ9UL26 194 aa8.58□□□□□ -1.04
MRPS28-206ENST00000520946 LINC00473A8K010 186 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 A8MWP6 167 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 PTGES3LE9PB15 166 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 RAB27BO00194 218 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 CYB5BO43169 146 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 DIRAS3O95661 229 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 CDK1P06493 297 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 UCHL1P09936 223 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 HSMCR30P0CW71 290 aa8.57□□□□□ -1.04
MRPS28-206ENST00000520946 ATF4P18848 351 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms