RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ZNF714Q96N38 554 aa8.47□□□□□ -1.05
MCF2-209ENST00000520602 IDI2-AS1Q9NZ38 188 aa8.47□□□□□ -1.05
MCF2-209ENST00000520602 CISD1Q9NZ45 108 aaKnown RBP8.47□□□□□ -1.05
MCF2-209ENST00000520602 A0A0G2JNJ9 132 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 CTXND1A0A1B0GTU2 59 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 CD5P06127 495 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 PRB3Q04118 309 aaPredicted RBP8.46□□□□□ -1.05
MCF2-209ENST00000520602 TFF3Q07654 80 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 FABP9Q0Z7S8 132 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 RTP5Q14D33 572 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 LRRC75BQ2VPJ9 315 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 PRR30Q53SZ7 412 aaPredicted RBP8.46□□□□□ -1.05
MCF2-209ENST00000520602 DHRS7BQ6IAN0 325 aaPredicted RBP8.46□□□□□ -1.05
MCF2-209ENST00000520602 SLC35E3Q7Z769 313 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 OR13D1Q8NGV5 346 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 TIMD4Q96H15 378 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 C12orf57Q99622 126 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 Q9UFV3 132 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 TCF19Q9Y242 345 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 OR51B2Q9Y5P1 312 aa8.46□□□□□ -1.05
MCF2-209ENST00000520602 NCKAP5O14513 1909 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 KBTBD11-OT1A0A1B0GTJ5 212 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 MDFIC2A0A1B0GVS7 189 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 CLDN34H7C241 214 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 IGKV1-39P01597 117 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 IGKV1D-39P04432 117 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 CCL3L1P16619 93 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 CHRNA7P36544 502 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 NUBP1P53384 320 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 ASCL5Q7RTU5 278 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 DOK5Q9P104 306 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 ONECUT1Q9UBC0 465 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 NCOR2Q9Y618 2525 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 C11orf94C9JXX5 98 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 PPP5D1E7EU14 171 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 DEFA4P12838 97 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 B2MP61769 119 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 ARL16Q0P5N6 197 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 MIC13Q5XKP0 118 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 SLC24A4Q8NFF2 622 aa8.46□□□□□ -1.06
MCF2-209ENST00000520602 FLYWCH2Q96CP2 140 aaKnown RBP8.46□□□□□ -1.06
MCF2-209ENST00000520602 CACNA1BQ00975 2339 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 HSPB1P04792 205 aaKnown RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 MDKP21741 143 aaPredicted RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 DUTP33316 252 aaKnown RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 OPRK1P41145 380 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 SUB1P53999 127 aaKnown RBP eCLIP8.45□□□□□ -1.06
MCF2-209ENST00000520602 RPL19P84098 196 aaKnown RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 IGFL2Q6UWQ7 119 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 TGIF2LYQ8IUE0 185 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 TGIF2LXQ8IUE1 241 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 MRPL41Q8IXM3 137 aaKnown RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 CORO2AQ92828 525 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 DCAF16Q9NXF7 216 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 C17orf100A8MU93 164 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 SNRPCP09234 159 aaKnown RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 ERVFRD-1P60508 538 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 FAM78BQ5VT40 261 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 ZNF880Q6PDB4 577 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 KCNIP4Q6PIL6 250 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 C11orf53Q8IXP5 236 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 PRR7Q8TB68 274 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 SPG11Q96JI7 2443 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 IFT22Q9H7X7 185 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 ANKHD1Q8IWZ3 2542 aaKnown RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 PPP1R2P9O14990 202 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 IGHV3-48P01763 117 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 OR9G9P0C7N8 305 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 MGST1P10620 155 aaKnown RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 PAX9P55771 341 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 HTD2P86397 168 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 NEIL1Q96FI4 390 aaPredicted RBP8.45□□□□□ -1.06
MCF2-209ENST00000520602 NIT2Q9NQR4 276 aa8.45□□□□□ -1.06
MCF2-209ENST00000520602 MALRD1Q5VYJ5 2156 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 MEF2BQ02080 365 aaPredicted RBP8.44□□□□□ -1.06
MCF2-209ENST00000520602 BSXQ3C1V8 233 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 VMA21Q3ZAQ7 101 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 ZNF343Q6P1L6 599 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 OR10A7Q8NGE5 316 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 OR4P4Q8NGL7 312 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 SMDT1Q9H4I9 107 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 ELOVL5Q9NYP7 299 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 PRNDQ9UKY0 176 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 SAA2-SAA4A0A096LPE2 208 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 LYNX1G3V0Z9 82 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 SLC31A2O15432 143 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 IGLV1-44P01699 117 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 SRP19P09132 144 aaKnown RBP8.44□□□□□ -1.06
MCF2-209ENST00000520602 SAA2P0DJI9 122 aaPredicted RBP8.44□□□□□ -1.06
MCF2-209ENST00000520602 LYNX1P0DP58 116 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 CHRNB4P30926 498 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 HSPE1P61604 102 aaKnown RBP8.44□□□□□ -1.06
MCF2-209ENST00000520602 NCMAPQ5T1S8 102 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 DUX4L9Q6RFH8 374 aaPredicted RBP8.44□□□□□ -1.06
MCF2-209ENST00000520602 IGFL3Q6UXB1 125 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 HIST1H2BAQ96A08 127 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 RPEQ96AT9 228 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 ZNF251Q9BRH9 671 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms