RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 GLT6D1Q7Z4J2 308 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 TMED4Q7Z7H5 227 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 UMODL1-AS1Q8N2C9 162 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 SLC22A24Q8N4F4 322 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 RNF182Q8N6D2 247 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 ROPN1LQ96C74 230 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 CNBD2Q96M20 576 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 SIGMAR1Q99720 223 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 CMSS1Q9BQ75 279 aaKnown RBP2.26□□□□□ -2.05
SQLE-204ENST00000520493 SELENOSQ9BQE4 189 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 ZNF2Q9BSG1 426 aaPredicted RBP2.26□□□□□ -2.05
SQLE-204ENST00000520493 UPK3BQ9BT76 320 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 C11orf1Q9H5F2 150 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 GPR84Q9NQS5 396 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 MARCOQ9UEW3 520 aaPredicted RBP2.26□□□□□ -2.05
SQLE-204ENST00000520493 ANGPT4Q9Y264 503 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 COQ4Q9Y3A0 265 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 ADAMTSL1Q8N6G6 1762 aa2.26□□□□□ -2.05
SQLE-204ENST00000520493 BPTFQ12830 3046 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 WRNQ14191 1432 aaPredicted RBP eCLIP2.25□□□□□ -2.05
SQLE-204ENST00000520493 TNRC18O15417 2968 aaPredicted RBP2.25□□□□□ -2.05
SQLE-204ENST00000520493 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 A0A1W2PQ67 120 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 DHRS12A0PJE2 317 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 A8MWP6 167 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 COX7A2LO14548 114 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 NDUFB2O95178 105 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 FOXA1P55317 472 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 KLF3P57682 345 aaPredicted RBP2.25□□□□□ -2.05
SQLE-204ENST00000520493 TSPEAR-AS2P59090 65 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 SNRPD2P62316 118 aaKnown RBP2.25□□□□□ -2.05
SQLE-204ENST00000520493 PSG4Q00888 419 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 KRR1Q13601 381 aaKnown RBP2.25□□□□□ -2.05
SQLE-204ENST00000520493 POU6F1Q14863 301 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 KRTAP13-2Q52LG2 175 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 TEX36Q5VZQ5 186 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 FNDC9Q8TBE3 224 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 PPP1R2P1Q96PQ5 205 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 PHB2Q99623 299 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 KIFC1Q9BW19 673 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 ULBP3Q9BZM4 244 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 IDI2-AS1Q9NZ38 188 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 GPR179Q6PRD1 2367 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 MYO18BQ8IUG5 2567 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 SPATA31E1Q6ZUB1 1445 aa2.25□□□□□ -2.05
SQLE-204ENST00000520493 NUP155O75694 1391 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 MTUS2Q5JR59 1369 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 PTPRJQ12913 1337 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 A0A1B0GU33 70 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 OR4C46A6NHA9 309 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 KNCNA6PVL3 124 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 C9JCJ5 164 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 FAAHO00519 579 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 TBPL1P62380 186 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 RPL19P84098 196 aaKnown RBP2.24□□□□□ -2.05
SQLE-204ENST00000520493 LGALSLQ3ZCW2 172 aaPredicted RBP2.24□□□□□ -2.05
SQLE-204ENST00000520493 ZNF660Q6AZW8 331 aaPredicted RBP2.24□□□□□ -2.05
SQLE-204ENST00000520493 AMTNQ6UX39 209 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 SDIM1Q6ZPB5 146 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 TMEM136Q6ZRR5 245 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 S100A7AQ86SG5 101 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 LYG2Q86SG7 212 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 OOSP2Q86WS3 158 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 GPHB5Q86YW7 130 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 OR2T4Q8NH00 348 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 OR4K13Q8NH42 304 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 SGMS2Q8NHU3 365 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 MUC7Q8TAX7 377 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 C12orf43Q96C57 262 aaKnown RBP2.24□□□□□ -2.05
SQLE-204ENST00000520493 MND1Q9BWT6 205 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 PRTFDC1Q9NRG1 225 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 ARMC1Q9NVT9 282 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 SNX12Q9UMY4 172 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 PKIGQ9Y2B9 76 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 V9GYQ6 96 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 NLRC5Q86WI3 1866 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 RGS12O14924 1447 aa2.24□□□□□ -2.05
SQLE-204ENST00000520493 ROCK1Q13464 1354 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 CEP164Q9UPV0 1460 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 GRIFINA4D1Z8 144 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 K7EM74 188 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 LST1O00453 97 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 HLA-DRB1P01911 266 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 CRYGDP07320 174 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 OR4E1P0C645 316 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 ESDP10768 282 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 KCNE1P15382 129 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 CRYBB3P26998 211 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 RPL5P46777 297 aaKnown RBP2.23□□□□□ -2.05
SQLE-204ENST00000520493 POLR2GP62487 172 aaKnown RBP eCLIP2.23□□□□□ -2.05
SQLE-204ENST00000520493 GNA12Q03113 381 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 LY6EQ16553 131 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 LGALS9BQ3B8N2 356 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 TNFAIP8L3Q5GJ75 292 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 LGALS9CQ6DKI2 356 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 RASL11AQ6T310 242 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 ZNF561Q8N587 486 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 Q8NAQ8 132 aa2.23□□□□□ -2.05
SQLE-204ENST00000520493 MCFD2Q8NI22 146 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms