RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 NPYP01303 97 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 TNNC2P02585 160 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 CBR1P16152 277 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 GZMHP20718 246 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 MRPS15P82914 257 aaKnown RBP2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 CAV1Q03135 178 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 TRAPPC5Q8IUR0 188 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 SGMS2Q8NHU3 365 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 SLC35B4Q969S0 331 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 OR51V1Q9H2C8 321 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 VPS29Q9UBQ0 182 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 MMACHCQ9Y4U1 282 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 DCCP43146 1447 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 ABCC12Q96J65 1359 aa2.48□□□□□ -2.01
HMGB1P46-201ENST00000520062 LCTP09848 1927 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 DICER1Q9UPY3 1922 aaKnown RBP2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 SULT1B1O43704 296 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 ALOX5APP20292 161 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 TAS2R20P59543 309 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 SPCS3P61009 180 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 HIST2H3PS2Q5TEC6 136 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 SPOPLQ6IQ16 392 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 GLT6D1Q7Z4J2 308 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 TMEM86BQ8N661 226 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 LHFPL5Q8TAF8 219 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 ROPN1LQ96C74 230 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 OR52E6Q96RD3 313 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 CXorf21Q9HAI6 301 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 ANGPT4Q9Y264 503 aa2.47□□□□□ -2.01
HMGB1P46-201ENST00000520062 MUC21A0A0G2JKD1 596 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 MUC21A0A140T8X8 626 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 A0A1W2PQD3 144 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 LST1O00453 97 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 KPNA3O00505 521 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 GNRH2O43555 120 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 LYPLA2O95372 231 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 RPS17P08708 135 aaKnown RBP2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 UCHL1P09936 223 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 FXYD7P58549 80 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 POLR2GP62487 172 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 DR1Q01658 176 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 FOXF1Q12946 379 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 TNFAIP8L3Q5GJ75 292 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 ALKAL1Q6UXT8 129 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 OR13C8Q8NGS7 320 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 NMNAT3Q96T66 252 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 FAM96AQ9H5X1 160 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 PSTPIP2Q9H939 334 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 SLC22A13Q9Y226 551 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 PRELID1Q9Y255 219 aa2.46□□□□□ -2.02
HMGB1P46-201ENST00000520062 NAV1Q8NEY1 1877 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 TGIF2-C20orf24A0A0A6YYL0 155 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 KNCNA6PVL3 124 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 EEF1E1-BLOC1S5C9J1V9 151 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 C3orf84H3BNL1 204 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 TRAPPC3O43617 180 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 ZNF728P0DKX0 622 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 IDH3GP51553 393 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 BASP1P80723 227 aaKnown RBP2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 ANKRD7Q92527 254 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 CNBD2Q96M20 576 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 PECRQ9BY49 303 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 XAGE1AQ9HD64 81 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 ATPIF1Q9UII2 106 aa2.45□□□□□ -2.02
HMGB1P46-201ENST00000520062 SDK2Q58EX2 2172 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 NUP160Q12769 1436 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 SLIT2O94813 1529 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 A0A1W2PQL4 384 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 C11orf86A6NJI1 115 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 TMEM210A6NLX4 147 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 CLDN24A6NM45 220 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 J3QRE1 110 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 ZNF189O75820 626 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 CD79AP11912 226 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 HAAOP46952 286 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 LSM6P62312 80 aaKnown RBP2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 CCL7P80098 99 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 IFITM2Q01629 132 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 AKR1C1Q04828 323 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 AESQ08117 197 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 LRRC25Q8N386 305 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 PACRGLQ8N7B6 248 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 CLDN22Q8N7P3 220 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 OR51D1Q8NGF3 324 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 DNAJC30Q96LL9 226 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 Q9BRP9 147 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 RSL24D1Q9UHA3 163 aaKnown RBP2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 ZNF337Q9Y3M9 751 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 GRIN2BQ13224 1484 aa2.44□□□□□ -2.02
HMGB1P46-201ENST00000520062 CHD5Q8TDI0 1954 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 MDFIC2A0A1B0GVS7 189 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 A8MUN3 132 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 C2orf74A8MZ97 194 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 INMT-MINDY4F8WBC2 141 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 PLA2G10O15496 165 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 TCRBP04435 133 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 CTXN2P0C2S0 81 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 KCNE1P15382 129 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms