RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 EGR2P11161 476 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-215ENST00000519474 SNRPBP14678 240 aaKnown RBP7.31□□□□□ -1.24
HDAC3-215ENST00000519474 MYL9P24844 172 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 PSMB9P28065 219 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 MC5RP33032 325 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 CDX1P47902 265 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-215ENST00000519474 ATP5IP56385 69 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-215ENST00000519474 FOXE3Q13461 319 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 KIR2DS1Q14954 304 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 C5orf64Q2M2E5 130 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 RNF212Q495C1 297 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 CDNFQ49AH0 187 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 KHDC1LQ5JSQ8 128 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 TOR2AQ5JU69 321 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 HACD4Q5VWC8 232 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 FAM71F2Q6NXP2 309 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 C8orf86Q6ZUL3 223 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 KCTD7Q96MP8 289 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 KLK15Q9H2R5 256 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 OR51J1Q9H342 316 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 PEF1Q9UBV8 284 aaKnown RBP7.31□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF230Q9UIE0 474 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF107Q9UII5 783 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF580Q9UK33 172 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 NOTCH3Q9UM47 2321 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 WSB1Q9Y6I7 421 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 CEPT1Q9Y6K0 416 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 CMYA5Q8N3K9 4069 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 METTL21EPA6NDL7 271 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 CBY3A6NI87 242 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 G3V318 75 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 CCL24O00175 119 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 RRHO14718 337 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 FABP7O15540 132 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 HLA-DRB1P01911 266 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 FCGR3AP08637 254 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 H2AFB1P0C5Y9 115 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 CLEC2LP0C7M8 214 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 TRAPPC2P0DI81 140 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 TRAPPC2BP0DI82 140 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 PSMB8P28062 276 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 KRTAP10-11P60412 298 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 CX3CL1P78423 397 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 IL18Q14116 193 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 SRSF7Q16629 238 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF773Q6PK81 442 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 FAM131AQ6UXB0 335 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 REC114Q7Z4M0 266 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF695Q8IW36 515 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF383Q8NA42 475 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 OR4A4PQ8NGN8 299 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 EDARADDQ8WWZ3 215 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 FCGR1BQ92637 280 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 RCC1LQ96I51 464 aaKnown RBP7.3□□□□□ -1.24
HDAC3-215ENST00000519474 RAX2Q96IS3 184 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 DUX3Q96PT4 197 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 RNF5Q99942 180 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-215ENST00000519474 ATG5Q9H1Y0 275 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 FBXL15Q9H469 300 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 RNF167Q9H6Y7 350 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 NECAP2Q9NVZ3 263 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 AURKAIP1Q9NWT8 199 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-215ENST00000519474 SDHAF2Q9NX18 166 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 RDH8Q9NYR8 311 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 STUB1Q9UNE7 303 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 SSR3Q9UNL2 185 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 RNF24Q9Y225 148 aa7.3□□□□□ -1.24
HDAC3-215ENST00000519474 IGKV1D-8A0A087WSZ0 117 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 TRBV6-7A0A0A0MS04 114 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 A4D1N5 150 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 OR5H14A6NHG9 310 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 ATP6V0E1O15342 81 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 MED6O75586 246 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 DUS4LO95620 317 aaKnown RBP7.29□□□□□ -1.24
HDAC3-215ENST00000519474 IGLV1-40P01703 118 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 OR8U9P0C7N5 309 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 HIST1H1DP16402 221 aaKnown RBP7.29□□□□□ -1.24
HDAC3-215ENST00000519474 GADD45AP24522 165 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 CD40LGP29965 261 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 SLC6A1P30531 599 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 SDC2P34741 201 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 CDC34P49427 236 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-215ENST00000519474 AP3S2P59780 193 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 ASAH1Q13510 395 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 PSG5Q15238 335 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 C19orf54Q5BKX5 351 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 CXorf66Q5JRM2 361 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-215ENST00000519474 DNLZQ5SXM8 178 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF660Q6AZW8 331 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-215ENST00000519474 Q6ZS49 121 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 TMEM17Q86X19 198 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF491Q8N8L2 437 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 KLHL30-AS1Q8NEE0 82 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 OR8U1Q8NH10 309 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 CABLES2Q9BTV7 478 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF221Q9UK13 617 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 FBXO7Q9Y3I1 522 aa7.29□□□□□ -1.24
HDAC3-215ENST00000519474 A0A1B0GV90 55 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms