RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 FAM27BQ5VT28 67 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 SLC13A5Q86YT5 568 aaPredicted RBP-0.02□□□□□ -2.41
PCM1-208ENST00000518877 CNPY4Q8N129 248 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 UMODL1-AS1Q8N2C9 162 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 Q8N6K4 173 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 NATD1Q8N6N6 113 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 ZNF565Q8N9K5 539 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 LRRC20Q8TCA0 184 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 PPCDCQ96CD2 204 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 TMEM208Q9BTX3 173 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 EIF5A2Q9GZV4 153 aaKnown RBP-0.02□□□□□ -2.41
PCM1-208ENST00000518877 EMC3Q9P0I2 261 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 NAT8Q9UHE5 227 aa-0.02□□□□□ -2.41
PCM1-208ENST00000518877 TRAV8-1A0A0A6YYK1 113 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 MEIS3P1A6NDR6 274 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 KRTAP2-3P0C7H8 128 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 UBBP0CG47 229 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 SYT1P21579 422 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 CRATP43155 626 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 OR4D1Q15615 310 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 RPS19BP1Q86WX3 136 aaKnown RBP-0.03□□□□□ -2.41
PCM1-208ENST00000518877 PPWD1Q96BP3 646 aaKnown RBP-0.03□□□□□ -2.41
PCM1-208ENST00000518877 TESCQ96BS2 214 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 TLCD1Q96CP7 247 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 SMR3AQ99954 134 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 KRTAP2-4Q9BYR9 128 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 KRTAP2-1Q9BYU5 128 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 CHST6Q9GZX3 395 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 HDGFL3Q9Y3E1 203 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 CACNA1EQ15878 2313 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 CNTRLQ7Z7A1 2325 aa-0.03□□□□□ -2.41
PCM1-208ENST00000518877 TNRC6AQ8NDV7 1962 aaKnown RBP-0.04□□□□□ -2.42
PCM1-208ENST00000518877 TMEM269A0A1B0GVZ9 245 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 C19orf84I3L1E1 186 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 AZIN1O14977 448 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 SCN2BO60939 215 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 HLA-DQB2P05538 268 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 PSMB8P28062 276 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 H2BFSP57053 126 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 PLPPR5Q32ZL2 321 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 RASSF6Q6ZTQ3 369 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 SPATA24Q86W54 205 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 RPP25LQ8N5L8 163 aaKnown RBP-0.04□□□□□ -2.42
PCM1-208ENST00000518877 OR8B3Q8NGG8 313 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 RAB2BQ8WUD1 216 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 CCDC12Q8WUD4 166 aaPredicted RBP-0.04□□□□□ -2.42
PCM1-208ENST00000518877 TMEM109Q9BVC6 243 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 MROQ9BYG7 248 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 ASCL3Q9NQ33 180 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 PARVAQ9NVD7 372 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.04□□□□□ -2.42
PCM1-208ENST00000518877 SYNE1Q8NF91 8797 aaKnown RBP-0.04□□□□□ -2.42
PCM1-208ENST00000518877 STRCQ7RTU9 1775 aa-0.04□□□□□ -2.42
PCM1-208ENST00000518877 CCDC88AQ3V6T2 1871 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 COPEO14579 308 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 CREBL2O60519 120 aaPredicted RBP-0.05□□□□□ -2.42
PCM1-208ENST00000518877 NSA2O95478 260 aaKnown RBP-0.05□□□□□ -2.42
PCM1-208ENST00000518877 FADS2O95864 444 aaKnown RBP-0.05□□□□□ -2.42
PCM1-208ENST00000518877 NUP62P37198 522 aaPredicted RBP-0.05□□□□□ -2.42
PCM1-208ENST00000518877 CD79BP40259 229 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 REG1BP48304 166 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 EVX1P49640 407 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 JOSD1Q15040 202 aaPredicted RBP-0.05□□□□□ -2.42
PCM1-208ENST00000518877 RBM48Q5RL73 367 aaKnown RBP-0.05□□□□□ -2.42
PCM1-208ENST00000518877 DCXRQ7Z4W1 244 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 SLC22A24Q8N4F4 322 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 OR10D3Q8NH80 312 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 SGMS2Q8NHU3 365 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 ACOT12Q8WYK0 555 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 C12orf43Q96C57 262 aaKnown RBP-0.05□□□□□ -2.42
PCM1-208ENST00000518877 MS4A6EQ96DS6 147 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 SMIM12Q96EX1 92 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 MED10Q9BTT4 135 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 OR8D2Q9GZM6 311 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 ZFP30Q9Y2G7 519 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 TIMM22Q9Y584 194 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 SNURFQ9Y675 71 aa-0.05□□□□□ -2.42
PCM1-208ENST00000518877 SNRNP200O75643 2136 aaKnown RBP-0.05□□□□□ -2.42
PCM1-208ENST00000518877 MED12Q93074 2177 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 SYNE2Q8WXH0 6885 aaKnown RBP-0.06□□□□□ -2.42
PCM1-208ENST00000518877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.06□□□□□ -2.42
PCM1-208ENST00000518877 GOLGA8QA0A0J9YX86 632 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 IRGMA1A4Y4 181 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 GOLGA8RI6L899 631 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 LIN7AO14910 233 aaPredicted RBP-0.06□□□□□ -2.42
PCM1-208ENST00000518877 MT-CO2P00403 227 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 RD3LP0DJH9 198 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 HIST1H1CP16403 213 aaKnown RBP-0.06□□□□□ -2.42
PCM1-208ENST00000518877 PVALBP20472 110 aaPredicted RBP-0.06□□□□□ -2.42
PCM1-208ENST00000518877 MIPP30301 263 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 KCNJ3P48549 501 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 CLDN12P56749 244 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 RPL30P62888 115 aaKnown RBP-0.06□□□□□ -2.42
PCM1-208ENST00000518877 FKBP1AP62942 108 aaKnown RBP-0.06□□□□□ -2.42
PCM1-208ENST00000518877 BTN3A2P78410 334 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 RUNX1Q01196 453 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 FABP5Q01469 135 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 ZNF846Q147U1 533 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 EXOC3L4Q17RC7 722 aa-0.06□□□□□ -2.42
PCM1-208ENST00000518877 LRRC26Q2I0M4 334 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms