RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 LRRC75A-AS1Q8N1F1 130 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 VSTM2AQ8TAG5 236 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 STOML3Q8TAV4 291 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 LHX4Q969G2 390 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 RPEQ96AT9 228 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 FLYWCH2Q96CP2 140 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 SIRPDQ9H106 197 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 ITGB1BP2Q9UKP3 347 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 FLNCQ14315 2725 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 SMG1Q96Q15 3661 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 ODF3BA8MYP8 253 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 OOSP1A8MZH6 123 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 SCAF4O95104 1147 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR9G9P0C7N8 305 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 TPT1P13693 172 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 REG1BP48304 166 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 DVL1P1P54792 670 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR4A47Q6IF82 309 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 SSX9Q7RTT3 188 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 VMO1Q7Z5L0 202 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR4A5Q8NH83 315 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 ST8SIA2Q92186 375 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 PHYHIPLQ96FC7 376 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 CLCC1Q96S66 551 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 SIRT7Q9NRC8 400 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 BET1LQ9NYM9 111 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 PSENENQ9NZ42 101 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 DPM3Q9P2X0 92 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 PRNDQ9UKY0 176 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 INSIG2Q9Y5U4 225 aa12.22□□□□□ -0.45
TRAPPC9-205ENST00000518839 AKAP6Q13023 2319 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 IGHV4-61A0A0C4DH41 118 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 LY6LH3BQJ8 138 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 KCNAB3O43448 404 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 TOX4O94842 621 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 NXPH3O95157 252 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 COL8A1P27658 744 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 LGALS7P47929 136 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 SPCS3P61009 180 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 RELBQ01201 579 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 EWSR1Q01844 656 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 CLEC12BQ2HXU8 276 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 PDLIM3Q53GG5 364 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 TPTE2P1Q5T6R2 138 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 STX12Q86Y82 276 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR8H3Q8N146 312 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 TMEM252Q8N6L7 170 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 HARBI1Q96MB7 349 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 RBKSQ9H477 322 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 FKBP11Q9NYL4 201 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 FBXL17Q9UF56 701 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 ARHGAP32A7KAX9 2087 aa12.21□□□□□ -0.45
TRAPPC9-205ENST00000518839 IGHV4-30-2A0A087WSY4 118 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 BORCS7-ASMTA0A0B4J1R7 106 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 IGHV1-3A0A0C4DH29 117 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 FAM24AA6NFZ4 105 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 CEBPZOSA8MTT3 80 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 UPK2O00526 184 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 JTBO76095 146 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 SPDEFO95238 335 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 IGKV1-16P04430 117 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 IL6RP08887 468 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 PAX9P55771 341 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 RPS16P62249 146 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 DIAPH2-AS1Q14236 149 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 VMA21Q3ZAQ7 101 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 HCP5Q6MZN7 132 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 CCDC144NLQ6NUI1 221 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 DTD1Q8TEA8 209 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 SCARB1Q8WTV0 552 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 NRGNQ92686 78 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 RNF5Q99942 180 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 MS4A7Q9GZW8 240 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 CYTL1Q9NRR1 136 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 NUP50Q9UKX7 468 aa12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 FOXA2Q9Y261 457 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 TBL2Q9Y4P3 447 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-205ENST00000518839 IGSF23A1L1A6 192 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 FAM157AC9JC47 383 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 CFDP00746 253 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 IFNA17P01571 189 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 FGF2P09038 288 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 IAPPP10997 89 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 HOXB4P17483 251 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 USF1P22415 310 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 SULT1A1P50225 295 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 UBE2E1P51965 193 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 LGALS4P56470 323 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 RAB14P61106 215 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 RPP30P78346 268 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 BAP18Q8IXM2 172 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 VKORC1L1Q8N0U8 176 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms