RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PGLYRP1O75594 196 aaPredicted RBP17.23■□□□□ 0.35
VEGFA-217ENST00000518538 RAB3DO95716 219 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 RPL23AP62750 156 aaKnown RBP17.23■□□□□ 0.35
VEGFA-217ENST00000518538 PJVKQ0ZLH3 352 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 FXYD3Q14802 87 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 C19orf54Q5BKX5 351 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 CXorf66Q5JRM2 361 aaPredicted RBP17.23■□□□□ 0.35
VEGFA-217ENST00000518538 STEAP1BQ6NZ63 245 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 SPAG16Q8N0X2 631 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 TCTEX1D1Q8N7M0 179 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 OR4D10Q8NGI6 311 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 OR51H1Q8NH63 302 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 FAM110DQ8TAY7 271 aaPredicted RBP17.23■□□□□ 0.35
VEGFA-217ENST00000518538 ARPC1AQ92747 370 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 ZFP57Q9NU63 452 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 NUBP2Q9Y5Y2 271 aa17.23■□□□□ 0.35
VEGFA-217ENST00000518538 ARPC1BO15143 372 aaKnown RBP17.22■□□□□ 0.35
VEGFA-217ENST00000518538 RAMP3O60896 148 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 PSMB8P28062 276 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 SSBP2P81877 361 aaPredicted RBP17.22■□□□□ 0.35
VEGFA-217ENST00000518538 TMEM267Q0VDI3 215 aaPredicted RBP17.22■□□□□ 0.35
VEGFA-217ENST00000518538 ECSCRQ19T08 205 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 MRGPRG-AS1Q2M3A8 158 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 FOXB2Q5VYV0 432 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 IDO2Q6ZQW0 420 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 LHFPL1Q86WI0 220 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 SLC38A6Q8IZM9 456 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 POC5Q8NA72 575 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 MINDY2Q8NBR6 621 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 CD300LFQ8TDQ1 290 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 R3HDM4Q96D70 268 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 FAM103A1Q9BTL3 118 aaKnown RBP17.22■□□□□ 0.35
VEGFA-217ENST00000518538 RSRP1Q9BUV0 290 aa17.22■□□□□ 0.35
VEGFA-217ENST00000518538 CREBL2O60519 120 aaPredicted RBP17.21■□□□□ 0.35
VEGFA-217ENST00000518538 CNIH1O95406 144 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 HRASP01112 189 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 RLN1P04808 185 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 S100GP29377 79 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 GNB1P62873 340 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 PRSS8Q16651 343 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 GRPEL2Q8TAA5 225 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 VSTM2AQ8TAG5 236 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 V9GYH0 126 aa17.21■□□□□ 0.35
VEGFA-217ENST00000518538 HPRT1P00492 218 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 IGLV1-40P01703 118 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 RPLP1P05386 114 aaKnown RBP17.2■□□□□ 0.34
VEGFA-217ENST00000518538 MEF2DQ14814 521 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 PHLDA2Q53GA4 152 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 AKIRIN2Q53H80 203 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 CCDC190Q86UF4 302 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 VKORC1L1Q8N0U8 176 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 RHOVQ96L33 236 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 AIFM2Q9BRQ8 373 aa17.2■□□□□ 0.34
VEGFA-217ENST00000518538 FOXA2Q9Y261 457 aaPredicted RBP17.2■□□□□ 0.34
VEGFA-217ENST00000518538 A0A1W2PN81 502 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 OR2A4O95047 310 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 AKAIN1P0CW23 69 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 PF4V1P10720 104 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 SLC6A1P30531 599 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 CHRNA7P36544 502 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 UNQ5815/PRO19632Q6UWF5 114 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 LCNL1Q6ZST4 164 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 PUSL1Q8N0Z8 303 aaKnown RBP17.19■□□□□ 0.34
VEGFA-217ENST00000518538 LFNGQ8NES3 379 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 OR2A7Q96R45 310 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 ZNF430Q9H8G1 570 aaPredicted RBP17.19■□□□□ 0.34
VEGFA-217ENST00000518538 PLEKHA2Q9HB19 425 aa17.19■□□□□ 0.34
VEGFA-217ENST00000518538 ANKRD20A5PA0PJZ0 165 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 KBTBD11O94819 623 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 ZNF735P0CB33 412 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 PGAM2P15259 253 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 F2RP25116 425 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 PTBP1P26599 531 aaKnown RBP eCLIP17.18■□□□□ 0.34
VEGFA-217ENST00000518538 TAS2R31P59538 309 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 TNXAQ16473 311 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 PYDC2Q56P42 97 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 TMEM65Q6PI78 240 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 MMD2Q8IY49 270 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 TERB2Q8NHR7 220 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 MYOZ3Q8TDC0 251 aa17.18■□□□□ 0.34
VEGFA-217ENST00000518538 ZNF486Q96H40 463 aaPredicted RBP17.18■□□□□ 0.34
VEGFA-217ENST00000518538 PLXNB1O43157 2135 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 SOX15O60248 233 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 ACTL6BO94805 426 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 ETV6P41212 452 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 ZNF79Q15937 498 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 POU2AF1Q16633 256 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 SCGB2B2Q4G0G5 96 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 FAAP20Q6NZ36 180 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 C18orf65Q6ZTR6 163 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 SSX9Q7RTT3 188 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 KLHL30-AS1Q8NEE0 82 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 OR4C16Q8NGL9 310 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 OR5M8Q8NGP6 311 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 OR6Q1Q8NGQ2 317 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 TMEM167AQ8TBQ9 72 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 TMEM68Q96MH6 324 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 THAP7Q9BT49 309 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-217ENST00000518538 SLC2A9Q9NRM0 540 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 COMMD9Q9P000 198 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms