RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SHOXO15266 292 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 NBR2O15453 112 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 FGF16O43320 207 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 SLC25A17O43808 307 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 HPRT1P00492 218 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 IGKV1-5P01602 117 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 SAA1P0DJI8 122 aaPredicted RBP7.83□□□□□ -1.16
CLN8-202ENST00000517514 UBE2KP61086 200 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 NDPQ00604 133 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 PJVKQ0ZLH3 352 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 DCTN2Q13561 401 aaKnown RBP7.83□□□□□ -1.16
CLN8-202ENST00000517514 MMDQ15546 238 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 C5orf64Q2M2E5 130 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 ANKRD55Q3KP44 614 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 KRTAP24-1Q3LI83 254 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 MZT2BQ6NZ67 158 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 LIAT1Q6ZQX7 453 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 Q6ZSV7 163 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 C16orf82Q7Z2V1 217 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 Q8N2B8 174 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 CENPSQ8N2Z9 138 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 TCTEX1D1Q8N7M0 179 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.83□□□□□ -1.16
CLN8-202ENST00000517514 SEC22AQ96IW7 307 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 JMJD8Q96S16 334 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 HSPB9Q9BQS6 159 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 TMEM222Q9H0R3 208 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 ALX4Q9H161 411 aaPredicted RBP7.83□□□□□ -1.16
CLN8-202ENST00000517514 PLEKHA2Q9HB19 425 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 BEX1Q9HBH7 125 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 LIN7CQ9NUP9 197 aaKnown RBP7.83□□□□□ -1.16
CLN8-202ENST00000517514 NUDT15Q9NV35 164 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 PITPNC1Q9UKF7 332 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 SIGLEC9Q9Y336 463 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 A0A0B4J293 547 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 BTBD17A6NE02 478 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 NCBP2LA6PVI3 153 aaKnown RBP7.82□□□□□ -1.16
CLN8-202ENST00000517514 TSPAN9O75954 239 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 SPDEFO95238 335 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 SFT2D2O95562 160 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 CDS2O95674 445 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 IFNA2P01563 188 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 H2AFB2P0C5Z0 115 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 EGR2P11161 476 aaPredicted RBP7.82□□□□□ -1.16
CLN8-202ENST00000517514 MYOD1P15172 320 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 RPA2P15927 270 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 G6PCP35575 357 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 LGALS7P47929 136 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 IZUMO4Q1ZYL8 232 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 TMEM95Q3KNT9 176 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 TMEM128Q5BJH2 165 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 SELENOHQ8IZQ5 122 aaKnown RBP7.82□□□□□ -1.16
CLN8-202ENST00000517514 OR8H1Q8NGG4 311 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 OR52B4Q8NGK2 314 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 CD300LFQ8TDQ1 290 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 R3HDM4Q96D70 268 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 RHOVQ96L33 236 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 TMEM56Q96MV1 263 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 TSNAXQ99598 290 aaKnown RBP7.82□□□□□ -1.16
CLN8-202ENST00000517514 MARVELD1Q9BSK0 173 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 COMMD9Q9P000 198 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 METTL1Q9UBP6 276 aaKnown RBP7.82□□□□□ -1.16
CLN8-202ENST00000517514 FBXO7Q9Y3I1 522 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 NUBP2Q9Y5Y2 271 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 TMEM56-RWDD3S4R434 201 aa7.82□□□□□ -1.16
CLN8-202ENST00000517514 IGHV7-81A0A0B4J1V7 117 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 A0A1B0GW64 132 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 C9orf170A2RU37 121 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 CGB1A6NKQ9 187 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 DBX1A6NMT0 343 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 E7EUB6 86 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 TRIM77I1YAP6 450 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 HLA-DRB1P01911 266 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 OR4E1P0C645 316 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 OR9G9P0C7N8 305 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 NQO2P16083 231 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 RAB25P57735 213 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 TAS2R31P59538 309 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 DEFA1P59665 94 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 DEFA3P59666 94 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 UBE2MP61081 183 aaKnown RBP7.81□□□□□ -1.16
CLN8-202ENST00000517514 RPL15P61313 204 aaKnown RBP7.81□□□□□ -1.16
CLN8-202ENST00000517514 DHRS2Q13268 280 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 OR4A47Q6IF82 309 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 Q6ZRM9 215 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 SSX9Q7RTT3 188 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 SGPP2Q8IWX5 399 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 CADM3Q8N126 398 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 TEX45Q8NA69 505 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 TMEM167AQ8TBQ9 72 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 ENKURQ8TC29 256 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 ZFAND2BQ8WV99 257 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 SEC22CQ9BRL7 303 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 SERTAD4Q9NUC0 356 aa7.81□□□□□ -1.16
CLN8-202ENST00000517514 ANK2Q01484 3957 aa7.8□□□□□ -1.16
CLN8-202ENST00000517514 MARCH11A6NNE9 402 aa7.8□□□□□ -1.16
CLN8-202ENST00000517514 UPK2O00526 184 aa7.8□□□□□ -1.16
CLN8-202ENST00000517514 B3GALNT1O75752 331 aa7.8□□□□□ -1.16
CLN8-202ENST00000517514 KBTBD11O94819 623 aa7.8□□□□□ -1.16
CLN8-202ENST00000517514 NDUFA7O95182 113 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms