RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 FAM135AQ9P2D6 1515 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 TRGV5A0A0B4J1U4 118 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 A0A1B0GW15 77 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 PHYHO14832 338 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 OTCP00480 354 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 IGHV1-69P01742 117 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 OPRM1P35372 400 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 XIAPP98170 497 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 BSXQ3C1V8 233 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 MITD1Q8WV92 249 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 CHST5Q9GZS9 411 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 PRO3102Q9H379 93 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 MAT2BQ9NZL9 334 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 TMEM216Q9P0N5 145 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 LINC00527Q9UJ94 153 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 BZW2Q9Y6E2 419 aaKnown RBP0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 ADGRB2O60241 1585 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 PREX2Q70Z35 1606 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 MAP3K4Q9Y6R4 1608 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 EPRSP07814 1512 aaKnown RBP0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 DYNC2H1Q8NCM8 4307 aaKnown RBP0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 A0A1W2PQD3 144 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 PLA2G10O15496 165 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 CRYBA1P05813 215 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 OR1E2P47887 323 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 FAM3AP98173 230 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 GLO1Q04760 184 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 VAMP3Q15836 100 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 DRAM2Q6UX65 266 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 MTERF4Q7Z6M4 381 aaKnown RBP0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 ABHD14BQ96IU4 210 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 ZNF514Q96K75 400 aaPredicted RBP0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 PRRG3Q9BZD7 231 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 C8orf4Q9NR00 106 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 MUC12Q9UKN1 5478 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 USH2AO75445 5202 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 ROBO1Q9Y6N7 1651 aa0.55□□□□□ -2.32
SCARNA1-201ENST00000517138 ASXL3Q9C0F0 2248 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 VPS13CQ709C8 3753 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 GREB1Q4ZG55 1949 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 CEP170BQ9Y4F5 1589 aaPredicted RBP0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 HEATR5AQ86XA9 2040 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 MYCBP2O75592 4640 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 GOLGA8IPA6NC78 632 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 EFCAB9A8MZ26 197 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 CSTAP01040 98 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 ATP6V0CP27449 155 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 RCVRNP35243 200 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 TMEM258P61165 79 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 GTF2BQ00403 316 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 SLC36A2Q495M3 483 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 XKRXQ6PP77 449 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 FP248Q71RG6 208 aaPredicted RBP0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 PLCZ1Q86YW0 608 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 OR5K1Q8NHB7 308 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 ACBD6Q9BR61 282 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 MED28Q9H204 178 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 VCX3BQ9H321 246 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 METTL8Q9H825 291 aaKnown RBP0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 C22orf24Q9Y442 160 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 CENPEQ02224 2701 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 MAP1AP78559 2803 aaPredicted RBP0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 CPS1P31327 1500 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 TULP4Q9NRJ4 1543 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 SACSQ9NZJ4 4579 aa0.54□□□□□ -2.32
SCARNA1-201ENST00000517138 LAMC3Q9Y6N6 1575 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 DNAH1Q9P2D7 4330 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 USP32Q8NFA0 1604 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 NRXN3Q9Y4C0 1643 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 LRP1BQ9NZR2 4599 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 RGPD1P0DJD0 1748 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 SPTBN1Q01082 2364 aaKnown RBP0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 CDK5R1Q15078 307 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 OR10K2Q6IF99 312 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 CCDC112Q8NEF3 446 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 IFT81Q8WYA0 676 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 TAMM41Q96BW9 452 aa0.53□□□□□ -2.32
SCARNA1-201ENST00000517138 MGAQ8IWI9 3026 aa0.53□□□□□ -2.33
SCARNA1-201ENST00000517138 TTC37Q6PGP7 1564 aa0.53□□□□□ -2.33
SCARNA1-201ENST00000517138 SHPRHQ149N8 1683 aa0.53□□□□□ -2.33
SCARNA1-201ENST00000517138 TJP1Q07157 1748 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 MARF1Q9Y4F3 1742 aaKnown RBP0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 A0A1B0GX12 115 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 STK16O75716 305 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 IGLV3-27P01718 113 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 CRPP02741 224 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 CD7P09564 240 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 OR13C7P0DN81 318 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 SURF2Q15527 256 aaPredicted RBP0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 LGALS9BQ3B8N2 356 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 OR51T1Q8NGJ9 327 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 RPS4Y2Q8TD47 263 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 ODF3Q96PU9 254 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 YTHDC2Q9H6S0 1430 aaKnown RBP0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 GRIN2AQ12879 1464 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 LRRC37A3O60309 1634 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 CROCC2H7BZ55 1655 aa0.52□□□□□ -2.33
SCARNA1-201ENST00000517138 THSD7AQ9UPZ6 1657 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms