RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 TRAV24A0A0B4J272 114 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 TRAV17A0A0B4J275 112 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 IGKV1D-13A0A0B4J2D9 117 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 TRGV8A0A0C4DH27 118 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 IGKV1-12A0A0C4DH73 117 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 A0A1B0GW15 77 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 A0A1W2PPE3 182 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 A0A1W2PRE2 83 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 hADV38S2A0JD32 116 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MED19A0JLT2 244 aaPredicted RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ODAMA1E959 279 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 IZUMO1RA6ND01 250 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 DPRXA6NFQ7 191 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 NKX6-3A6NJ46 265 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MARCH11A6NNE9 402 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 A8MWL6 223 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 IQCF6A8MYZ5 107 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 SNURFLB1AK76 121 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 C9orf172C9J069 976 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 C9JCJ5 164 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 DIRC3C9JPN6 131 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 H3BP45 60 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 M0R1X1 148 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CORTO00230 105 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ISLRO14498 428 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CHEK1O14757 476 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 PPIHO43447 177 aaKnown RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 OR7C2O60412 319 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZG16O60844 167 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 HSBP1O75506 76 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 TNFSF13O75888 250 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MMP23AO75900 390 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 TOX4O94842 621 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 IGKV1D-12P01611 117 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 HBZP02008 142 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 APCSP02743 223 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 SOD3P08294 240 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 LINC00614P0C842 121 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 LINC00869P0C866 280 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 STAG3L2P0CL84 134 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 C8orf88P0DMB2 117 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CT45A6P0DMU7 189 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CT45A5P0DMU8 189 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CT45A7P0DMV0 189 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 IGKV1-13P0DP09 117 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 GZMBP10144 247 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MGST1P10620 155 aaKnown RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CCL4P13236 92 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MYF5P13349 255 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CCL2P13500 99 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF25P17030 456 aaPredicted RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 NDUFB7P17568 137 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 KLK2P20151 261 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 BMP5P22003 454 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MAGEA5P43359 124 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CSN1S1P47710 185 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 LGALS7P47929 136 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MEOX1P50221 254 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 LHX2P50458 406 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 FABP6P51161 128 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 PTTG1IPP53801 180 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 TMPRSS3P57727 454 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 B3GALT5-AS1P59052 145 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ERVFRD-1P60508 538 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 UBE2G2P60604 165 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 KRTDAPP60985 99 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 YPEL3P61236 119 aaPredicted RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 NUTF2P61970 127 aaKnown RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 RPS16P62249 146 aaKnown RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MRPS11P82912 194 aaKnown RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 RUNX1Q01196 453 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 COL10A1Q03692 680 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 HGFACQ04756 655 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 AESQ08117 197 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 Q0VG73 95 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 GAMTQ14353 236 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 HERPUD1Q15011 391 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 PSG5Q15238 335 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 MORN2Q502X0 79 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 CT45A1Q5HYN5 189 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 PYY3Q5JQD4 70 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 COA6Q5JTJ3 125 aaKnown RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 C9orf152Q5JTZ5 239 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 DCAF10Q5QP82 559 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 SPATA46Q5T0L3 261 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 IBA57Q5T440 356 aaKnown RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 PEAR1Q5VY43 1037 aaPredicted RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 FAM90A2PQ658T7 463 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF385CQ66K41 422 aaPredicted RBP1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 STUMQ69YW2 141 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF343Q6P1L6 599 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 Q6P435 159 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ACSM6Q6P461 480 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 PCSK4Q6UW60 755 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 TOMM20LQ6UXN7 152 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 C12orf54Q6X4T0 127 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 SPNS3Q6ZMD2 512 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 ACP7Q6ZNF0 438 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 LINC00696Q6ZRV3 163 aa1.74□□□□□ -2.13
RNU1-40P-201ENST00000516816 Q6ZT83 130 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms