RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 DBTP11182 482 aaKnown RBP-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 HSPA13P48723 471 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 LINC00313P59037 77 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 AP1S1P61966 158 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 SUPT4H1P63272 117 aaKnown RBP-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 BTN3A2P78410 334 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 TOMM34Q15785 309 aaPredicted RBP-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 ALKBH6Q3KRA9 238 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 EPGNQ6UW88 154 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 ZNF676Q8N7Q3 588 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 PFN4Q8NHR9 129 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 TMEM234Q8WY98 164 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 NMNAT3Q96T66 252 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 PRRG3Q9BZD7 231 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 OR51B6Q9H340 312 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 C12orf4Q9NQ89 552 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 TUBG2Q9NRH3 451 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 RAB20Q9NX57 234 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 ABCC12Q96J65 1359 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 LYSTQ99698 3801 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 DNAH11Q96DT5 4516 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 MYH9P35579 1960 aaKnown RBP-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 KBTBD11-OT1A0A1B0GTJ5 212 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 CLTAP09496 248 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 RAB38P57729 211 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 SEC61GP60059 68 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 TBC1D28Q2M2D7 210 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 CEACAM16Q2WEN9 425 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 IDNKQ5T6J7 187 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 SETD3Q86TU7 594 aaPredicted RBP-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 C10orf107Q8IVU9 208 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 CCDC170Q8IYT3 715 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 OR8H2Q8N162 312 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 OR51H1Q8NH63 302 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 ZNF75CPQ92670 426 aaPredicted RBP-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 LIMD2Q9BT23 127 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 MED18Q9BUE0 208 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 GTSF1LQ9H1H1 148 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 TMEM165Q9HC07 324 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 HES4Q9HCC6 221 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 ZNHIT6Q9NWK9 470 aaKnown RBP-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 FKBP14Q9NWM8 211 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 PRO0255Q9UI72 69 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 PITPNC1Q9UKF7 332 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 ARHGAP31Q2M1Z3 1444 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 SRCAPQ6ZRS2 3230 aa-3.56□□□□□ -2.98
RNU6-539P-201ENST00000516665 EIF3JO75822 258 aaKnown RBP-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 AHSA1O95433 338 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 LIPCP11150 499 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 TAF7Q15545 349 aaPredicted RBP-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 ZNF56Q15929 161 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 OCIAD2Q56VL3 154 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 THOC7Q6I9Y2 204 aaKnown RBP-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 RBM43Q6ZSC3 357 aaKnown RBP-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 PHLPP2Q6ZVD8 1323 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 BZW1Q7L1Q6 419 aaKnown RBP-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 ZBTB8OSQ8IWT0 167 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 OR2T27Q8NH04 317 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 ZYG11BQ9C0D3 744 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 TMEM138Q9NPI0 162 aa-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 CHCHD2Q9Y6H1 151 aaPredicted RBP-3.57□□□□□ -2.98
RNU6-539P-201ENST00000516665 KIF13BQ9NQT8 1826 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 TCAPO15273 167 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 TYMSP04818 313 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 CCND2P30279 289 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 AQP5P55064 265 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 C21orf59P57076 290 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 YBEYP58557 167 aaPredicted RBP-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 SPANXN5Q5MJ07 72 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 SPESP1Q6UW49 350 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 OR2D3Q8NGH3 330 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 DYNC2LI1Q8TCX1 351 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 ELMO1Q92556 727 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 TMEM43Q9BTV4 400 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 TMEM147Q9BVK8 224 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 SLC7A5P2Q9GIP4 190 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 ARGLU1Q9NWB6 273 aaPredicted RBP-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 IL19Q9UHD0 177 aa-3.58□□□□□ -2.98
RNU6-539P-201ENST00000516665 MIA2Q96PC5 1412 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 FAM240AA0A1B0GVK7 77 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 H3BRM9 83 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 BOLA2-SMG1P6H3BVE0 249 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 PDCD6O75340 191 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 IGLV3-27P01718 113 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 C1QBP02746 253 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 ARL2P36404 184 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 RABIFP47224 123 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 UBE2MP61081 183 aaKnown RBP-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 DYNC1I2Q13409 638 aaKnown RBP-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 CABS1Q96KC9 395 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 EBPLQ9BY08 206 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 DNAJC12Q9UKB3 198 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 SNX24Q9Y343 169 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 RELNP78509 3460 aa-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 GCN1Q92616 2671 aaKnown RBP-3.59□□□□□ -2.98
RNU6-539P-201ENST00000516665 NUP160Q12769 1436 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 F5H768 121 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 SULT1B1O43704 296 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 CST1P01037 141 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 KRT7P08729 469 aa-3.6□□□□□ -2.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms