RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 HBBP68871 147 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 IMMP2LQ96T52 175 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 WDR54Q9H977 334 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 SLC25A10Q9UBX3 287 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-214ENST00000515035 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 SNAI2O43623 268 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 MPV17P39210 176 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 RPS20P60866 119 aaKnown RBP11.41□□□□□ -0.58
TCOF1-214ENST00000515035 Q96M66 194 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 SPCS1Q9Y6A9 102 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 GCHFRP30047 84 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 PRSS53Q2L4Q9 553 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 ZNF818PQ6ZRF7 136 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 C10orf126Q8N4M7 172 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 TTC9CQ8N5M4 171 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 ZNF714Q96N38 554 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 FAM206AQ9NX38 181 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 CLDN16Q9Y5I7 305 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 C1QTNF9BB2RNN3 333 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 ZNF441Q8N8Z8 693 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 NGFRP08138 427 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 ANOS1P23352 680 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 ID1P41134 155 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 DERL1Q9BUN8 251 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 RTN4RQ9BZR6 473 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 PRDM13Q9H4Q3 707 aa11.4□□□□□ -0.58
TCOF1-214ENST00000515035 A0A087WWC5 75 aa11.4□□□□□ -0.59
TCOF1-214ENST00000515035 UCP3P55916 312 aa11.4□□□□□ -0.59
TCOF1-214ENST00000515035 KCNMB1Q16558 191 aa11.4□□□□□ -0.59
TCOF1-214ENST00000515035 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.59
TCOF1-214ENST00000515035 NABP2Q9BQ15 211 aa11.4□□□□□ -0.59
TCOF1-214ENST00000515035 MRPL16Q9NX20 251 aaKnown RBP11.4□□□□□ -0.59
TCOF1-214ENST00000515035 DLL3Q9NYJ7 618 aa11.4□□□□□ -0.59
TCOF1-214ENST00000515035 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 RNF222A6NCQ9 220 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 SAMD13Q5VXD3 122 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 ZNF418Q8TF45 676 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-214ENST00000515035 TUBA4BQ9H853 241 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 LHFPL6Q9Y693 200 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 EPOPA6NHQ4 379 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 LINC01590Q5TEZ4 76 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 SLC25A47Q6Q0C1 308 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 SFXN3Q9BWM7 321 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 MS4A5Q9H3V2 200 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 CASP8AP2Q9UKL3 1982 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 IGKV1-8A0A0C4DH67 115 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 H3BTX0 84 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 SLC17A3O00476 420 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 RRHO14718 337 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 ABHD12Q8N2K0 398 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 EAF1Q96JC9 268 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-214ENST00000515035 CHRNA10Q9GZZ6 450 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 G6PC2Q9NQR9 355 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 TCF19Q9Y242 345 aa11.39□□□□□ -0.59
TCOF1-214ENST00000515035 IGHV3-72A0A0B4J1Y9 119 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 RAMP1O60894 148 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 RNASE1P07998 156 aaKnown RBP11.38□□□□□ -0.59
TCOF1-214ENST00000515035 MC5RP33032 325 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 GCSAMQ8N6F7 178 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 OR10J6PQ8NGY7 276 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 C19orf24Q9BVV8 132 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 IL36BQ9NZH7 164 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 TRIP12Q14669 1992 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-214ENST00000515035 GDF9O60383 454 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
TCOF1-214ENST00000515035 ZNF658BQ4V348 819 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-214ENST00000515035 RNFT1Q5M7Z0 435 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 C16orf92Q96LL3 132 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 PHLDA3Q9Y5J5 127 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 CGB1A6NKQ9 187 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-214ENST00000515035 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 STPG3Q8N7X2 389 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 NEUROG1Q92886 237 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 GALNT14Q96FL9 552 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 CCL13Q99616 98 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-214ENST00000515035 LINC00470Q9BZP3 86 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 NRXN2Q9P2S2 1712 aa11.38□□□□□ -0.59
TCOF1-214ENST00000515035 ATG2BQ96BY7 2078 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 PPIAL4EA0A075B759 164 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 PPIAL4DF5H284 164 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 CA1P00915 261 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-214ENST00000515035 PPIAL4FP0DN26 164 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 FGF11Q92914 225 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 PPIAL4AQ9Y536 164 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 AKAP6Q13023 2319 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 DLX6P56179 175 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 CX3CL1P78423 397 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 C18orf15Q96N68 181 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 PLSCR2Q9NRY7 297 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 TMEM56-RWDD3S4R434 201 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms