RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RBM7Q9Y580 266 aaKnown RBP1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 GRIN2BQ13224 1484 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 CCDC88AQ3V6T2 1871 aa1.6□□□□□ -2.15
HMGCS1-207ENST00000514610 REG1AP05451 166 aa1.6□□□□□ -2.15
HMGCS1-207ENST00000514610 MAP3K7CLP57077 242 aa1.6□□□□□ -2.15
HMGCS1-207ENST00000514610 SLC38A11Q08AI6 406 aa1.6□□□□□ -2.15
HMGCS1-207ENST00000514610 COTL1Q14019 142 aa1.6□□□□□ -2.15
HMGCS1-207ENST00000514610 PLPPR5Q32ZL2 321 aa1.6□□□□□ -2.15
HMGCS1-207ENST00000514610 OR10K2Q6IF99 312 aa1.6□□□□□ -2.15
HMGCS1-207ENST00000514610 APOMO95445 188 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 TYMSP04818 313 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 CDC34P49427 236 aaPredicted RBP1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 EMP2P54851 167 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 FKBP1AP62942 108 aaKnown RBP1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 CST9Q5W186 159 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 SBSNQ6UWP8 590 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 Q6ZSA8 131 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 RASSF6Q6ZTQ3 369 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 COA5Q86WW8 74 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 TMEM156Q8N614 296 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 OTUD6BQ8N6M0 293 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 HAVCR2Q8TDQ0 301 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 ASB17Q8WXJ9 295 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 CMTM5Q96DZ9 223 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 GNPNAT1Q96EK6 184 aaPredicted RBP1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 CCL13Q99616 98 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 VCX3BQ9H321 246 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 HRASLSQ9HDD0 168 aa1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 ZNHIT6Q9NWK9 470 aaKnown RBP1.59□□□□□ -2.15
HMGCS1-207ENST00000514610 SDK1Q7Z5N4 2213 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 IGHV3-64A0A075B6Q5 118 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 A0A0A6YYH2 397 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 A6NJ64 397 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 COX7A2LO14548 114 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 PGLYRP1O75594 196 aaPredicted RBP1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 RELAQ04206 551 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 MLLT11Q13015 90 aaPredicted RBP1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 MIAQ16674 131 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 C1orf194Q5T5A4 169 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 FAM151BQ6UXP7 276 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 Q8N402 240 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 UBL4BQ8N7F7 174 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 TMEM161BQ8NDZ6 487 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 OR1L8Q8NGR8 309 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 OR2T27Q8NH04 317 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 DDI1Q8WTU0 396 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 SPZ1Q9BXG8 430 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 COQ4Q9Y3A0 265 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 KIF15Q9NS87 1388 aa1.58□□□□□ -2.16
HMGCS1-207ENST00000514610 RALGAPA2Q2PPJ7 1873 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 CUL9Q8IWT3 2517 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 TRGV2A0A075B6R0 118 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 C1QCP02747 245 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 IL3P08700 152 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 TAS2R20P59543 309 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 GLO1Q04760 184 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 MED21Q13503 144 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 TNFAIP8L2Q6P589 184 aaPredicted RBP1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 COMMD7Q86VX2 200 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 UMODL1-AS1Q8N2C9 162 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 SGMS2Q8NHU3 365 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 IMMP2LQ96T52 175 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 MAP1LC3AQ9H492 121 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 NKIRAS1Q9NYS0 192 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 DOK5Q9P104 306 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 DKKL1Q9UK85 242 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 MAST2Q6P0Q8 1798 aa1.57□□□□□ -2.16
HMGCS1-207ENST00000514610 PCDH15Q96QU1 1955 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 M0QZ92 97 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 PFDN6O15212 129 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 SSNA1O43805 119 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 DEFA4P12838 97 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 CCL1P22362 96 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 DDTP30046 118 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 CA5AP35218 305 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 FXYD7P58549 80 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 TMEM258P61165 79 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 RSU1Q15404 277 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 LRRC75BQ2VPJ9 315 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 SLC51BQ86UW2 128 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 OR8B12Q8NGG6 310 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 MRPL32Q9BYC8 188 aaKnown RBP1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 ANAPC10Q9UM13 185 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 POLR1DQ9Y2S0 133 aa1.56□□□□□ -2.16
HMGCS1-207ENST00000514610 RTTNQ86VV8 2226 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 RP1L1Q8IWN7 2480 aaPredicted RBP1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 H0Y980 276 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 KLRC4O43908 158 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 ZNF737O75373 536 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 OCM2P0CE71 109 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 ZNF705DP0CH99 300 aaPredicted RBP1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 ZNF705BP0CI00 300 aaPredicted RBP1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 C8orf88P0DMB2 117 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 MAGEA2P43356 314 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 REG1BP48304 166 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 SLC36A2Q495M3 483 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 TMEM155Q4W5P6 130 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 LYZL1Q6UWQ5 148 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 CXorf21Q9HAI6 301 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 CCDC88CQ9P219 2028 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms