RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 DHFRP00374 187 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 MT-ND2P03891 347 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF705DP0CH99 300 aaPredicted RBP5.14□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF705BP0CI00 300 aaPredicted RBP5.14□□□□□ -1.59
CLDND1-229ENST00000513988 FGF9P31371 208 aaPredicted RBP5.14□□□□□ -1.59
CLDND1-229ENST00000513988 RPL37AP61513 92 aaKnown RBP5.14□□□□□ -1.59
CLDND1-229ENST00000513988 NUTF2P61970 127 aaKnown RBP5.14□□□□□ -1.59
CLDND1-229ENST00000513988 IFFO1Q0D2I5 559 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 ODF1Q14990 250 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 RSU1Q15404 277 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 SLC35D3Q5M8T2 416 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 UBE2UQ5VVX9 321 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF705AQ6ZN79 300 aaPredicted RBP5.14□□□□□ -1.59
CLDND1-229ENST00000513988 FAM24BQ8N5W8 94 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF383Q8NA42 475 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 TMEM116Q8NCL8 245 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 PXT1Q8NFP0 134 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 DAZAP1Q96EP5 407 aaKnown RBP5.14□□□□□ -1.59
CLDND1-229ENST00000513988 C7orf26Q96N11 449 aa5.14□□□□□ -1.59
CLDND1-229ENST00000513988 IGHV3-49A0A0A0MS15 119 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 IGHV7-4-1A0A0J9YVY3 117 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 HMX3A6NHT5 357 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 C15orf62A8K5M9 175 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 NPIPB5A8MRT5 1133 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 NDUFA4O00483 81 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 GEMIN2O14893 280 aaKnown RBP5.13□□□□□ -1.59
CLDND1-229ENST00000513988 HIST1H1BP16401 226 aaKnown RBP5.13□□□□□ -1.59
CLDND1-229ENST00000513988 SOX2P48431 317 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 RBM11P57052 281 aaKnown RBP5.13□□□□□ -1.59
CLDND1-229ENST00000513988 CXCR4P61073 352 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 KISS1Q15726 138 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 VMA21Q3ZAQ7 101 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 ANKRD39Q53RE8 183 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 C10orf55Q5SWW7 151 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 FAM90A2PQ658T7 463 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 TCF24Q7RTU0 167 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 CEACAM19Q7Z692 300 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 OR9Q2Q8NGE9 314 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF502Q8TBZ5 544 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 STON2Q8WXE9 905 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 FAM162AQ96A26 154 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 GALMQ96C23 342 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 PELI1Q96FA3 418 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 ELAC2Q9BQ52 826 aaKnown RBP5.13□□□□□ -1.59
CLDND1-229ENST00000513988 EBF4Q9BQW3 602 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 MS4A6AQ9H2W1 248 aa5.13□□□□□ -1.59
CLDND1-229ENST00000513988 TRAV2A0A0B4J234 112 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 LOC102723971A0A1B0GUV8 181 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 LINC00473A8K010 186 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 MCRIP1C9JLW8 97 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 CD5P06127 495 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 UBCP0CG48 685 aaKnown RBP5.12□□□□□ -1.59
CLDND1-229ENST00000513988 CAPGP40121 348 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 OR2B8PP59922 312 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 RPL11P62913 178 aaKnown RBP5.12□□□□□ -1.59
CLDND1-229ENST00000513988 CBX3Q13185 183 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 ESRGQ1W209 222 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 IDO2Q6ZQW0 420 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 Q6ZRU5 148 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF554Q86TJ5 538 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 CPOQ8IVL8 374 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 TEX45Q8NA69 505 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 MNS1Q8NEH6 495 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 OR52N1Q8NH53 320 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 TNFAIP8L1Q8WVP5 186 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 GGHQ92820 318 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 KCTD14Q9BQ13 255 aaPredicted RBP5.12□□□□□ -1.59
CLDND1-229ENST00000513988 FAM192AQ9GZU8 254 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 RABAC1Q9UI14 185 aa5.12□□□□□ -1.59
CLDND1-229ENST00000513988 IGHV3OR16-13A0A075B7E8 117 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 IGHV3-74A0A0B4J1X5 117 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 OR2T8A6NH00 312 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 SRRM4A7MD48 611 aaKnown RBP5.11□□□□□ -1.59
CLDND1-229ENST00000513988 SIVA1O15304 175 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 CREBL2O60519 120 aaPredicted RBP5.11□□□□□ -1.59
CLDND1-229ENST00000513988 GPX5O75715 221 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 IGLV2-8P01709 118 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 DEFA4P12838 97 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 RRM2P31350 389 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 GK3PQ14409 553 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 IRF3Q14653 427 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 MPV17LQ2QL34 196 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 NHLRC3Q5JS37 347 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF773Q6PK81 442 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 CYP2R1Q6VVX0 501 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 ANKRD42Q8N9B4 389 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 TEX47Q8TBZ9 253 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 IL1F10Q8WWZ1 152 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF414Q96IQ9 312 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 GPER1Q99527 375 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 ZNF430Q9H8G1 570 aaPredicted RBP5.11□□□□□ -1.59
CLDND1-229ENST00000513988 DNAJC4Q9NNZ3 241 aa5.11□□□□□ -1.59
CLDND1-229ENST00000513988 TEX22C9J3V5 150 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 NPPAP01160 153 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 GASTP01350 101 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 HBE1P02100 147 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 ATP5G1P05496 136 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 KRT8P05787 483 aa5.1□□□□□ -1.59
CLDND1-229ENST00000513988 EIF4EP06730 217 aaKnown RBP5.1□□□□□ -1.59
CLDND1-229ENST00000513988 CRYGCP07315 174 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms