RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 HMGN3Q15651 99 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 FAM222AQ5U5X8 452 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 IDO2Q6ZQW0 420 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 SSX7Q7RTT5 188 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 OR51A2Q8NGJ7 313 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 MRPL30Q8TCC3 161 aaKnown RBP8.22□□□□□ -1.09
SFXN1-210ENST00000513725 NSMCE2Q96MF7 247 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 RHPN1-AS1Q9BWJ2 59 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 SAR1AQ9NR31 198 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 ABCD2Q9UBJ2 740 aa8.22□□□□□ -1.09
SFXN1-210ENST00000513725 PUS1Q9Y606 427 aaKnown RBP eCLIP8.22□□□□□ -1.09
SFXN1-210ENST00000513725 UBE2QL1A1L167 161 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 B2RBV5 119 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 M0R1X1 148 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 DNASE2O00115 360 aaPredicted RBP8.21□□□□□ -1.1
SFXN1-210ENST00000513725 NDUFA4O00483 81 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 GAS8-AS1O95177 125 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 GNB3P16520 340 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 SOX2P48431 317 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 LINC00315P59091 139 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 PLA2G7Q13093 441 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 IRF3Q14653 427 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 CLINT1Q14677 625 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 ATP6AP1Q15904 470 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 C10orf55Q5SWW7 151 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 TMEM236Q5W0B7 351 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 PARP16Q8N5Y8 322 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 ZNF502Q8TBZ5 544 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 ELAC2Q9BQ52 826 aaKnown RBP8.21□□□□□ -1.1
SFXN1-210ENST00000513725 C1QTNF4Q9BXJ3 329 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 MAGT1Q9H0U3 335 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 C11orf54Q9H0W9 315 aaPredicted RBP8.21□□□□□ -1.1
SFXN1-210ENST00000513725 ZNF430Q9H8G1 570 aaPredicted RBP8.21□□□□□ -1.1
SFXN1-210ENST00000513725 TNXBP22105 4242 aa8.21□□□□□ -1.1
SFXN1-210ENST00000513725 IGHV3OR16-8A0A075B7F1 116 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 C15orf62A8K5M9 175 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 CHEK1O14757 476 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 GLAP06280 429 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 DEFA4P12838 97 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 OSMP13725 252 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 GNRHRP30968 328 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
SFXN1-210ENST00000513725 RTL8BQ17RB0 113 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 Q6ZRN7 208 aaPredicted RBP8.2□□□□□ -1.1
SFXN1-210ENST00000513725 MMD2Q8IY49 270 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 MFSD4AQ8N468 514 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 TMEM116Q8NCL8 245 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 NEU1Q99519 415 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 ZNF586Q9NXT0 402 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 DNAH8Q96JB1 4490 aa8.2□□□□□ -1.1
SFXN1-210ENST00000513725 MUC2Q02817 5179 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 IGHV7-4-1A0A0J9YVY3 117 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 A0A1W2PP11 408 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 SMIM9A6NGZ8 99 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 TEX22C9J3V5 150 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 CD5P06127 495 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 CRYGCP07315 174 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 NANOS3P60323 173 aaKnown RBP8.19□□□□□ -1.1
SFXN1-210ENST00000513725 KLK9Q2XQG4 91 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 TP53I3Q53FA7 332 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 DMRTA1Q5VZB9 504 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 FAM90A2PQ658T7 463 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 OR10H4Q8NGA5 316 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 GIPC3Q8TF64 312 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 DYDC1Q8WWB3 177 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 ANP32BQ92688 251 aaKnown RBP8.19□□□□□ -1.1
SFXN1-210ENST00000513725 OR14A2Q96R54 314 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 ISG20L2Q9H9L3 353 aaKnown RBP8.19□□□□□ -1.1
SFXN1-210ENST00000513725 EFCAB1Q9HAE3 211 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 Q9N2K0 584 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 KLK9Q9UKQ9 250 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 RFNGQ9Y644 331 aa8.19□□□□□ -1.1
SFXN1-210ENST00000513725 BAG2O95816 211 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 RRASP10301 218 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 ZBTB25P24278 435 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 MAS1LP35410 378 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 CEACAM6P40199 344 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 CCR9P51686 369 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 DAD1P61803 113 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 GPR176Q14439 515 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 OR2T5Q6IEZ7 315 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 OR2T29Q8NH02 315 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 ZNF556Q9HAH1 456 aa8.18□□□□□ -1.1
SFXN1-210ENST00000513725 FAM212BQ9NTI7 297 aaPredicted RBP8.18□□□□□ -1.1
SFXN1-210ENST00000513725 IGLV11-55A0A075B6I3 123 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 A0A087WTM6 91 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 TRAV2A0A0B4J234 112 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 OR2T8A6NH00 312 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 KNCNA6PVL3 124 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 PRKYO43930 277 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 RPSAP08865 295 aaKnown RBP8.17□□□□□ -1.1
SFXN1-210ENST00000513725 HTR1AP08908 422 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 PTBP1P26599 531 aaKnown RBP eCLIP8.17□□□□□ -1.1
SFXN1-210ENST00000513725 ZNF93P35789 620 aaPredicted RBP8.17□□□□□ -1.1
SFXN1-210ENST00000513725 PSME3P61289 254 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 NUTF2P61970 127 aaKnown RBP8.17□□□□□ -1.1
SFXN1-210ENST00000513725 SNRPGP62308 76 aaKnown RBP8.17□□□□□ -1.1
SFXN1-210ENST00000513725 TPBGQ13641 420 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 CDK10Q15131 360 aa8.17□□□□□ -1.1
SFXN1-210ENST00000513725 UBE2UQ5VVX9 321 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms