RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 BHLHA15Q7RTS1 189 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-211ENST00000513346 OR8B3Q8NGG8 313 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 OR4S2Q8NH73 311 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 BLNKQ8WV28 456 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 ZNF385AQ96PM9 386 aaKnown RBP9.63□□□□□ -0.87
TCOF1-211ENST00000513346 GPR35Q9HC97 309 aa9.63□□□□□ -0.87
TCOF1-211ENST00000513346 TRAV9-1A0A075B6T8 112 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 J3QT63 122 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 TMEM11P17152 192 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 AESQ08117 197 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 PDPNQ86YL7 162 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 TMEM56Q96MV1 263 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 A0A0J9YW62 118 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 GDF9O60383 454 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 NPY1RP25929 384 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 FNDC7Q5VTL7 733 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 PQLC2Q6ZP29 291 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 SPSB4Q96A44 273 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 TMEM45BQ96B21 275 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 TTTY12Q9BZ98 90 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 IL36RNQ9UBH0 155 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 MYO18BQ8IUG5 2567 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 NKX2-8O15522 239 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 IGLV3-19P01714 112 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 IGLV3-21P80748 117 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-211ENST00000513346 PRR7Q8TB68 274 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 PLSCR2Q9NRY7 297 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 ZSWIM8A7E2V4 1837 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 LINC00869P0C866 280 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 ARL14EPLP0DKL9 152 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 RIGQ13278 110 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 MMDQ15546 238 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 LRTM2Q8N967 370 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 NRN1Q9NPD7 142 aa9.62□□□□□ -0.87
TCOF1-211ENST00000513346 DOCK4Q8N1I0 1966 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 AGFG2O95081 481 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 NUDT3O95989 172 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 FAM89BQ8N5H3 189 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 TMEM56-RWDD3S4R434 201 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 MED12Q93074 2177 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 A0A1B0GV72 72 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 OPRK1P41145 380 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 FBXW9Q5XUX1 488 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 ZNF525Q8N782 197 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 OR8A1Q8NGG7 326 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 CXXC4Q9H2H0 198 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 PTPRQQ9UMZ3 2332 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 IGHV1-45A0A0A0MS14 117 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 TRAV1-1A0A0B4J248 108 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 COL8A1P27658 744 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 COMPP49747 757 aaPredicted RBP9.61□□□□□ -0.87
TCOF1-211ENST00000513346 FXYD3Q14802 87 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 MIC13Q5XKP0 118 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 LYG1Q8N1E2 194 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 ZDHHC16Q969W1 377 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 VOPP1Q96AW1 172 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 ADTRPQ96IZ2 230 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 NDFIP1Q9BT67 221 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 PRDM13Q9H4Q3 707 aa9.61□□□□□ -0.87
TCOF1-211ENST00000513346 A8MWL6 223 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 HLA-DRB1P01911 266 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 PRSS1P07477 247 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 SCGB1C2P0DMR2 95 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 ZNF137PP52743 207 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 OR4D5Q8NGN0 318 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 MESP1Q9BRJ9 268 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 KIF26BQ2KJY2 2108 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 ADMP35318 185 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 PI4KAP42356 2102 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 SNAI3Q3KNW1 292 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 TMEM70Q9BUB7 260 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 SNHG12Q9BXW3 62 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 RAB1BQ9H0U4 201 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 ONECUT1Q9UBC0 465 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 A0A0A6YYD4 124 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 IGKV1D-43A0A0B4J1Z2 117 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 OTX1P32242 354 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-211ENST00000513346 ID3Q02535 119 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 VMA21Q3ZAQ7 101 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 ST6GALNAC3Q8NDV1 305 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 OR52L2PQ8NGH6 319 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 RNASEH2CQ8TDP1 164 aaKnown RBP9.6□□□□□ -0.87
TCOF1-211ENST00000513346 RAB1CQ92928 201 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 PMCHL2Q9BQD1 86 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 LPAR2Q9HBW0 351 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 SEMA5BQ9P283 1151 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 PCNX1Q96RV3 2341 aa9.6□□□□□ -0.87
TCOF1-211ENST00000513346 hADV38S2A0JD32 116 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 SLC17A3O00476 420 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 CEACAM21Q3KPI0 293 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 LDLRAD2Q5SZI1 272 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 OR51G1Q8NGK1 321 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 KCNS1Q96KK3 526 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 ZNF488Q96MN9 340 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 OR8B2Q96RD0 313 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 HSPB7Q9UBY9 170 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 MDC1Q14676 2089 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms