RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 LRRC42Q9Y546 428 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 IGLV11-55A0A075B6I3 123 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 TRAV2A0A0B4J234 112 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 A0A0U1RQV1 116 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 HMX3A6NHT5 357 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 C15orf62A8K5M9 175 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF705FA8MVS1 300 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-208ENST00000512813 RS1O15537 224 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 CREBL2O60519 120 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-208ENST00000512813 CDRT1O95170 752 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 DHFRP00374 187 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 CRYGCP07315 174 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF705DP0CH99 300 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF705BP0CI00 300 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-208ENST00000512813 ATP6V1B2P21281 511 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 DAD1P61803 113 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 CLINT1Q14677 625 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 HMGN3Q15651 99 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 RAB12Q6IQ22 244 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 IDO2Q6ZQW0 420 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 MFSD4AQ8N468 514 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 FAM24BQ8N5W8 94 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 JAM3Q9BX67 310 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF430Q9H8G1 570 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-208ENST00000512813 RFNGQ9Y644 331 aa6.42□□□□□ -1.38
CLCN3-208ENST00000512813 IGHV3OR16-8A0A075B7F1 116 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 IGLV5-52A0A0A0MRZ9 124 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 IGHV7-4-1A0A0J9YVY3 117 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 DPPA5A6NC42 116 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 ACTL6BO94805 426 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 GNB3P16520 340 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 SERPINA2P20848 420 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 CDK5Q00535 292 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 PPP1R8Q12972 351 aaKnown RBP6.41□□□□□ -1.38
CLCN3-208ENST00000512813 NXNL2Q5VZ03 156 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 LILRB2Q8N423 598 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF114Q8NC26 417 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 TMEM116Q8NCL8 245 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 OR5D14Q8NGL3 314 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 OR2G2Q8NGZ5 317 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 IL1F10Q8WWZ1 152 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF414Q96IQ9 312 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 NSL1Q96IY1 281 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 OR14A2Q96R54 314 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 C11orf54Q9H0W9 315 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-208ENST00000512813 METTL9Q9H1A3 318 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 GORASP2Q9H8Y8 452 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 MRGBPQ9NV56 204 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 ABRACLQ9P1F3 81 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 HSF4Q9ULV5 492 aa6.41□□□□□ -1.38
CLCN3-208ENST00000512813 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 KNCNA6PVL3 124 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 NDUFAB1O14561 156 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 CD5P06127 495 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 FGF9P31371 208 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-208ENST00000512813 CBX3Q13185 183 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 Q6ZSA8 131 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 MMD2Q8IY49 270 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 RNF141Q8WVD5 230 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 TBX5Q99593 518 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 TM2D1Q9BX74 207 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 MS4A6AQ9H2W1 248 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 ISG20L2Q9H9L3 353 aaKnown RBP6.4□□□□□ -1.38
CLCN3-208ENST00000512813 ARL8BQ9NVJ2 186 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 PEX16Q9Y5Y5 336 aa6.4□□□□□ -1.38
CLCN3-208ENST00000512813 A0A1W2PP11 408 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 M0R1X1 148 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 DNASE2O00115 360 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-208ENST00000512813 GLAP06280 429 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 GTF2F2P13984 249 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 PTBP1P26599 531 aaKnown RBP eCLIP6.39□□□□□ -1.393e-10■■■■■ 55.5
CLCN3-208ENST00000512813 ATP6AP1Q15904 470 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 ACTL10Q5JWF8 245 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 UBE2UQ5VVX9 321 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 TCF24Q7RTU0 167 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 PARP16Q8N5Y8 322 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-208ENST00000512813 OR51A2Q8NGJ7 313 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 NTN5Q8WTR8 489 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-208ENST00000512813 BSCL2Q96G97 398 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-208ENST00000512813 CYYR1Q96J86 154 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 HOPXQ9BPY8 73 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-208ENST00000512813 PAK1IP1Q9NWT1 392 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-208ENST00000512813 FRRS1LQ9P0K9 344 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 ABCD2Q9UBJ2 740 aa6.39□□□□□ -1.39
CLCN3-208ENST00000512813 YTHDF2Q9Y5A9 579 aaKnown RBP6.39□□□□□ -1.39
CLCN3-208ENST00000512813 IGHV3-49A0A0A0MS15 119 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 A0A1W2PQL4 384 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-208ENST00000512813 UBE2QL1A1L167 161 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 OR2T8A6NH00 312 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 ZNF780AO75290 641 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-208ENST00000512813 IL6RP08887 468 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-208ENST00000512813 AREGP15514 252 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 RAB3AP20336 220 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 NANOS3P60323 173 aaKnown RBP6.38□□□□□ -1.39
CLCN3-208ENST00000512813 TAGLNQ01995 201 aaKnown RBP6.38□□□□□ -1.39
CLCN3-208ENST00000512813 PLA2G7Q13093 441 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms