RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 HACD4Q5VWC8 232 aa9.56□□□□□ -0.88
VEGFA-216ENST00000512683 LINC00322Q6ZN03 302 aaPredicted RBP9.56□□□□□ -0.88
VEGFA-216ENST00000512683 FAM223AQ8IWN6 122 aa9.56□□□□□ -0.88
VEGFA-216ENST00000512683 BVESQ8NE79 360 aa9.56□□□□□ -0.88
VEGFA-216ENST00000512683 DDB2Q92466 427 aa9.56□□□□□ -0.88
VEGFA-216ENST00000512683 HARBI1Q96MB7 349 aa9.56□□□□□ -0.88
VEGFA-216ENST00000512683 DAPK2Q9UIK4 370 aa9.56□□□□□ -0.88
VEGFA-216ENST00000512683 SSR3Q9UNL2 185 aa9.56□□□□□ -0.88
VEGFA-216ENST00000512683 MSGN1A6NI15 193 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 LINC00473A8K010 186 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 SSX5O60225 188 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 CLEC2LP0C7M8 214 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 OR9G9P0C7N8 305 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 SDC2P34741 201 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 TALDO1P37837 337 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 DYRK1AQ13627 763 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 ARL6IP1Q15041 203 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 PRSS8Q16651 343 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 SFXN4Q6P4A7 337 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 SLC25A42Q86VD7 318 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 ADAD2Q8NCV1 583 aaKnown RBP9.55□□□□□ -0.88
VEGFA-216ENST00000512683 OSR1Q8TAX0 266 aaPredicted RBP9.55□□□□□ -0.88
VEGFA-216ENST00000512683 LGALS14Q8TCE9 139 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 KCTD12Q96CX2 325 aaKnown RBP9.55□□□□□ -0.88
VEGFA-216ENST00000512683 SPIN2AQ99865 258 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 SPIN2BQ9BPZ2 258 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 GINS4Q9BRT9 223 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 RNF167Q9H6Y7 350 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 SLC2A8Q9NY64 477 aa9.55□□□□□ -0.88
VEGFA-216ENST00000512683 RRP15Q9Y3B9 282 aaKnown RBP9.55□□□□□ -0.88
VEGFA-216ENST00000512683 TRBV9A0A0B4J1U6 114 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 TMEM235A6NFC5 223 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 SLC22A5O76082 557 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 TPPPO94811 219 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 DUTP33316 252 aaKnown RBP9.54□□□□□ -0.88
VEGFA-216ENST00000512683 ATP5G2Q06055 141 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 HAPLN4Q86UW8 402 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 NECAP1Q8NC96 275 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 NUDCD2Q8WVJ2 157 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 ST6GALNAC5Q9BVH7 336 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 DCSTAMPQ9H295 470 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 COA4Q9NYJ1 87 aa9.54□□□□□ -0.88
VEGFA-216ENST00000512683 TECRQ9NZ01 308 aaKnown RBP9.54□□□□□ -0.88
VEGFA-216ENST00000512683 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.53□□□□□ -0.88
VEGFA-216ENST00000512683 TUSC2O75896 110 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 ACTL6BO94805 426 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 IGLV2-14P01704 120 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 HLA-DQB1P01920 261 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 MXD1Q05195 221 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 TTC9CQ8N5M4 171 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 OR5H6Q8NGV6 325 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 SLC25A38Q96DW6 304 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 PHB2Q99623 299 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 HIPK2Q9H2X6 1198 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 RHBDL2Q9NX52 303 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 OR2W1Q9Y3N9 320 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 RBM7Q9Y580 266 aaKnown RBP9.53□□□□□ -0.88
VEGFA-216ENST00000512683 CEPT1Q9Y6K0 416 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 BIRC6Q9NR09 4857 aa9.53□□□□□ -0.88
VEGFA-216ENST00000512683 IGKV1D-13A0A0B4J2D9 117 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 J3QRK9 145 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 LGALS9O00182 355 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 MPPED1O15442 326 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 CRYZL1O95825 349 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 CTXN2P0C2S0 81 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 IGKV1-13P0DP09 117 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 CD36P16671 472 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 NFYAP23511 347 aaPredicted RBP9.52□□□□□ -0.89
VEGFA-216ENST00000512683 KIR2DS2P43631 304 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 RHOGP84095 191 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 NEDD8Q15843 81 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 KCTD21Q4G0X4 260 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 CNIH2Q6PI25 160 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 MMD2Q8IY49 270 aa9.52□□□□□ -0.89
VEGFA-216ENST00000512683 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
VEGFA-216ENST00000512683 LOC100506127A0A0U1RQW1 187 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 ZNF785A8K8V0 405 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 GGCTO75223 188 aaKnown RBP9.51□□□□□ -0.89
VEGFA-216ENST00000512683 SCGNO76038 276 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 SCAND1P57086 179 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 RPL30P62888 115 aaKnown RBP9.51□□□□□ -0.89
VEGFA-216ENST00000512683 EIF4EBP1Q13541 118 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-216ENST00000512683 TNXAQ16473 311 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 DEFB114Q30KQ6 69 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 IDO2Q6ZQW0 420 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 GPHB5Q86YW7 130 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 ZNF645Q8N7E2 425 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 NEURL2Q9BR09 285 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 AKIP1Q9NQ31 210 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 ANXA10Q9UJ72 324 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 PRELID3BQ9Y3B1 194 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 ETV7Q9Y603 341 aa9.51□□□□□ -0.89
VEGFA-216ENST00000512683 CSMD3Q7Z407 3707 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 TRAV18A0A075B6X5 111 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 BMPR1BO00238 502 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 RBMXL2O75526 392 aaKnown RBP9.5□□□□□ -0.89
VEGFA-216ENST00000512683 TRBV12-3P01733 135 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 APELAP0DMC3 54 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 BRWD1-AS2P59051 145 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 GNG2P59768 71 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms