RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 PRR20DP86480 221 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 PRR20BP86481 221 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 PRR20AP86496 221 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 UNC119Q13432 240 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 GNMTQ14749 295 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 GRPEL2Q8TAA5 225 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 LGALS14Q8TCE9 139 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 TSNAXQ99598 290 aaKnown RBP8.64□□□□□ -1.03
RNF4-216ENST00000511859 NICN1Q9BSH3 213 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 TMEM59Q9BXS4 323 aa8.64□□□□□ -1.03
RNF4-216ENST00000511859 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
RNF4-216ENST00000511859 A0A1B0GVY2 172 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 UBE2CO00762 179 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 GLAP06280 429 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 APOC4P55056 127 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 QRFPP83859 136 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 RAB12Q6IQ22 244 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 OR5H6Q8NGV6 325 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 KCNG3Q8TAE7 436 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 SLC25A46Q96AG3 418 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 WDR89Q96FK6 387 aaPredicted RBP8.63□□□□□ -1.03
RNF4-216ENST00000511859 PARP12Q9H0J9 701 aaKnown RBP8.63□□□□□ -1.03
RNF4-216ENST00000511859 IFI27L2Q9H2X8 130 aa8.63□□□□□ -1.03
RNF4-216ENST00000511859 RSL24D1Q9UHA3 163 aaKnown RBP8.63□□□□□ -1.03
RNF4-216ENST00000511859 A0A0A6YYD4 124 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 C2orf70A6NJV1 201 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 TMEM14DPA8MWL7 114 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 FOLR2P14207 255 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 RPS16P62249 146 aaKnown RBP8.62□□□□□ -1.03
RNF4-216ENST00000511859 RPS27AP62979 156 aaKnown RBP8.62□□□□□ -1.03
RNF4-216ENST00000511859 ZNF45Q02386 682 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 GLDNQ6ZMI3 551 aaPredicted RBP8.62□□□□□ -1.03
RNF4-216ENST00000511859 OR52B4Q8NGK2 314 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 Q96M66 194 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 SULT4A1Q9BR01 284 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 DCUN1D5Q9BTE7 237 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 GHRLQ9UBU3 117 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 PEX16Q9Y5Y5 336 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 DNAH11Q96DT5 4516 aa8.62□□□□□ -1.03
RNF4-216ENST00000511859 BMPR1BO00238 502 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 SOCS1O15524 211 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 IFNA4P05014 189 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 RORCP51449 518 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 RPL39P5Q59GN2 51 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 FAM209BQ5JX69 171 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 DYNC2LI1Q8TCX1 351 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 RNF183Q96D59 192 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 BCL7BQ9BQE9 202 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 KRTAP4-5Q9BYR2 181 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 LPAR5Q9H1C0 372 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 ATG5Q9H1Y0 275 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 COA4Q9NYJ1 87 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 COMMD3Q9UBI1 195 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 RAB22AQ9UL26 194 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 PKD1P98161 4303 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 A0A075B6Q4 140 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 SMIM31A0A1B0GVY4 71 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 UBE2QL1A1L167 161 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 FAM90A7PA6NKC0 464 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 FAM90A23PA8MXZ1 464 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 LGALS9O00182 355 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 ST8SIA5O15466 376 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 ZNF182P17025 639 aaPredicted RBP8.61□□□□□ -1.03
RNF4-216ENST00000511859 FUT3P21217 361 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 DEFA5Q01523 94 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 SIGIRRQ6IA17 410 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 CROCCP3Q8IVE0 287 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 SAMD12Q8N8I0 201 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 URM1Q9BTM9 101 aaKnown RBP8.61□□□□□ -1.03
RNF4-216ENST00000511859 MFFQ9GZY8 342 aa8.61□□□□□ -1.03
RNF4-216ENST00000511859 HSPG2P98160 4391 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.6□□□□□ -1.03
RNF4-216ENST00000511859 KIR2DL5BA0A0G2JN68 375 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 KIR2DL5BA0A0G2JPC4 375 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 FAM223BA6NKX1 122 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 ITGB1BP1O14713 200 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 HPGDSO60760 199 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 IGKV1-16P04430 117 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 CBLN1P23435 193 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 SSBP2P81877 361 aaPredicted RBP8.6□□□□□ -1.03
RNF4-216ENST00000511859 ATP5G2Q06055 141 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 TM4SF20Q53R12 229 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 ZNF57Q68EA5 555 aaPredicted RBP8.6□□□□□ -1.03
RNF4-216ENST00000511859 C6orf201Q7Z4U5 140 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 C5orf24Q7Z6I8 188 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 FAM223AQ8IWN6 122 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 KIR2DL5AQ8N109 375 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 STPG3Q8N7X2 389 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 KIR2DL5BQ8NHK3 375 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 MRPL30Q8TCC3 161 aaKnown RBP8.6□□□□□ -1.03
RNF4-216ENST00000511859 C2CD4CQ8TF44 421 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 DGCR14Q96DF8 476 aaKnown RBP8.6□□□□□ -1.03
RNF4-216ENST00000511859 SLC25A38Q96DW6 304 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 NEDD4LQ96PU5 975 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 AGMATQ9BSE5 352 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 FAAP24Q9BTP7 215 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 TM2D1Q9BX74 207 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 RHBDL2Q9NX52 303 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms